MCA_03148_1

Browser: contigB:3492994-3494095+

RNA-seq: read pairs 29, FPKM 1.0, percentile rank 9.1% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0723

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   362 - 366

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)

   1 - 279

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   301 - 335

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. TMhelix
   338 - 360

   TMHMM
   TMhelix (TMhelix)
4. TRANSMEMBRANE (Tran...)
   336 - 361

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)

   280 - 300

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
5. mobidb-lite (disord...)
   172 - 224

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_03148_1
MVNHNYAMLWKFTVDTVAFHVTCKEPCKLSDIHTELIAPVEYPGELYISRNGTIENIPNNDSTQSTETRPAEASTNCNEN
VNLHHIIVFDSLAGETENLFEFFASLLYQFENQKLEKQNAKPGKMLIDDVMVSKIELLVTSNRVGNLTFIEKALREATGL
MWSVEKAPALPPSPIISSENATNASYSHERPHGNGNSNDQQNPPTEYISSKLRPQNDPSFPRGTQHIFTATLKDENCTIV
HAALKFFDDEQFPYDYTPSNEINSKSTTDLVKGSFKNHQLFASTLVIGSMVFQNIVQFVLEELGSCLDYLKEQKNIEYYP
NIEYVHHSQTGGGIDAAIIVLTKINMIIILSPIFMVVYYYIWRLWY

GO term prediction