MCA_03137_1

Browser: contigB:3465798-3466884-

RNA-seq: read pairs 97, FPKM 3.3, percentile rank 14.3% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0190

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   361 - 361

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)

   304 - 314

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   1 - 277

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)

   335 - 339

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. TMhelix
   278 - 300

   TMHMM
   TMhelix (TMhelix)

   325 - 359

   TMHMM
   TMhelix (TMhelix)
4. TRANSMEMBRANE (Tran...)
   278 - 303

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)

   315 - 334

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)

   340 - 360

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
5. mobidb-lite (disord...)
   175 - 196

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_03137_1
MFEYDVAILPKLTIDMVAVHVLPKRPCKPSDIRKEFIPLDEYPCKYYLLRNDRTEEIPEEEDLTQSTERYETKDSANSNK
NATYVIVFDSFGSTECTMLHFNFLCLEQFKKLKEQFEKEKARAYGLFSSPPMILKFVFLASFNGVGNSQRIQNALEHTTG
VEWSVKEAVPIPTSHTAGSSYHNKSENQTQSPQNNLNDEPIDYFSSRIKCHTDPSSLSEKQYILTTTFKKIRGASVKIIS
ECVPPESVTEGYDSSVRFKITITRECTDTPSNDNQYSFIGWILLLVIMFAAVPVFAWTVLSAFDPELSSKVVDNYFFYIK
KAYHLVIAGIGILTSVLLKVLIVLIGMILLIVILRAAFLYF

GO term prediction