Protein

MCA_03082_1

Length
132 amino acids

Gene name: MRPL38

Description: 54S ribosomal protein L38, mitochondrial

Browser: contigB:3325551-3325950+

RNA-seq: read pairs 1694, FPKM 157.4, percentile rank 85.4% (100% = highest expression)

Protein function

Annotation:MRPL3854S ribosomal protein L38, mitochondrial
EGGNOG:0PPNTFG06530.1mitochondrial 54S ribosomal protein YmL38 YmL34
SGD closest match:S000001653MRPL3854S ribosomal protein L38, mitochondrial
CGD closest match:CAL0000195479orf19.5684Mitochondrial 54S ribosomal protein YmL38/YmL34

Protein alignments

%idAln lengthE-value
MIA_03114_180.58%1391e-74MIA_03114_1
A0A0J9XGW6_GEOCN75.91%1375e-71Similar to Saccharomyces cerevisiae YKL170W MRPL38 Mitochondrial ribosomal protein of the large subunit OS=Geotrichum candidum GN=BN980_GECA15s02870g PE=3 SV=1
A0A1D8PMU5_CANAL64.89%1315e-57Mitochondrial 54S ribosomal protein YmL38/YmL34 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5684 PE=3 SV=1
UniRef50_G8YK0064.89%1317e-52Piso0_002972 protein n=13 Tax=saccharomyceta TaxID=716545 RepID=G8YK00_PICSO
A0A060TB73_BLAAD68.70%1312e-54ARAD1B06028p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B06028g PE=3 SV=1
Q6C1C3_YARLI60.61%1324e-54YALI0F17512p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F17512g PE=3 SV=1
A0A1E3PGV0_9ASCO59.09%1324e-52Ribosomal protein L14 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_84100 PE=3 SV=1
RM38_YEAST55.07%1387e-4654S ribosomal protein L38, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL38 PE=1 SV=1
A0A1E4T9M2_9ASCO31.62%1172e-10Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_146828 PE=3 SV=1
A0A167E126_9ASCO33.33%1173e-10Ribosomal 60S subunit protein L23B OS=Sugiyamaella lignohabitans GN=RPL23B PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0910

Protein family membership

Domains and repeats

None predicted.

Detailed signature matches

  1. Family IPR000218
    Ribosomal protein L14P
    1. PF00238 (Ribosomal_L14)
    2. SM01374 (Ribosomal_...)
    3. SSF50193 (Ribosomal...)
    4. G3DSA:2.40.15...
    5. MF_01367 (Ribosomal...)
  2. Family IPR005745
    Ribosomal protein L14P, bacterial-type
    1. TIGR01067
  3. SITE IPR019972
    Ribosomal protein L14P, conserved site
    1. PS00049 (RIBOSOMAL_L14)

Protein sequence

>MCA_03082_1
MIYLKSLLNVIDNSGALVVECIKVLGKNPKNHARIGDKIVVVVQKARPLSNQATGAAAANKLRQGDMKHAVVVRTKQLQP
RSDGSVIRFDDNACVLINNSGEPIGTRVSGVVARELRDKGFNKIVALAPRTV

GO term prediction

Biological Process

GO:0006412 translation

Molecular Function

GO:0003735 structural constituent of ribosome

Cellular Component

GO:0005840 ribosome
GO:0015934 large ribosomal subunit