Protein
MCA_03074_1
Length
1,042 amino acids
Browser: contigB:3280383-3283620-
RNA-seq: read pairs 936, FPKM 11.1, percentile rank 27.6% (100% = highest expression)
Protein function
| EGGNOG: | 0PGI9 | PGUG_02056 | WD repeat-containing protein |
|---|---|---|---|
| SGD closest match: | S000006104 | RTT10 | Regulator of Ty1 transposition protein 10 |
| CGD closest match: | CAL0000188018 | orf19.2143 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02452_1 | 49.76% | 1061 | 0.0 | MIA_02452_1 |
| A0A0J9XJ61_GEOCN | 45.15% | 1052 | 0.0 | Similar to Saccharomyces cerevisiae YPL183C RTT10 Cytoplasmic protein with a role in regulation of Ty1 transposition OS=Geotrichum candidum GN=BN980_GECA24s00230g PE=4 SV=1 |
| UniRef50_A0A0J9XJ61 | 45.15% | 1052 | 0.0 | Similar to Saccharomyces cerevisiae YPL183C RTT10 Cytoplasmic protein with a role in regulation of Ty1 transposition n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XJ61_GEOCN |
| A0A060TBA9_BLAAD | 34.28% | 1059 | 0.0 | ARAD1D33682p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D33682g PE=4 SV=1 |
| A0A170QZ15_9ASCO | 35.50% | 983 | 2e-172 | Rtt10p OS=Sugiyamaella lignohabitans GN=RTT10 PE=4 SV=1 |
| WDR6_YEAST | 31.45% | 1078 | 3e-135 | Regulator of Ty1 transposition protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RTT10 PE=1 SV=1 |
| A0A1D8PQF7_CANAL | 29.59% | 1068 | 9e-120 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2143 PE=4 SV=1 |
| A0A1E4TFY5_9ASCO | 28.21% | 1060 | 5e-111 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_108452 PE=4 SV=1 |
| Q6C839_YARLI | 30.93% | 1028 | 7e-106 | YALI0D23001p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D23001g PE=4 SV=1 |
| A0A1E3PJA6_9ASCO | 32.93% | 167 | 4e-19 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83127 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0020
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Repeat
-
Repeat
1
100
200
300
400
500
600
700
800
900
1042
Detailed signature matches
no IPR
Unintegrated signatures
Protein sequence
>MCA_03074_1 MSLNLQPKHHYGPVTALIFSDQYLLVGQGPSVKVYNYHTGELIDLKQAFKRNKIHGFSIADQKILAWGGRSLIVFEISQN GKLTLSQERYFNDWIVYGSISPNGSTYFILTAHNSVYEIEYDTSKIISYYTCPEENSILYSGSLFVPQETHSKANYLVAA GTVLDGVIVWDMKSGSVLYNFTSHEGSIFGVRFSDDGKYLLSCSDDRCIKLWDLQTSKEVATGWGHLARIWDIKFYQYTP NSAKFHIISASEDCTSRLWLVDLDKKTINTQRVMEGHLGRNTWCASINETLGIMATGGSDGRVRLWDLKEPQIIDENRNR LTLGSSGKKSEQFKSFKIFQNGGAIVLTTSLGNLYRWDSRGYTKLEIPGTDKKDTYIIMKIWNEIQTVAIAYHDGTCFIS NIYDTSKSTSVTNKLKSKLTDIHTWSFNSKYYLLSHSQNPQDDYILTVFNHNDGNLTVEQSLRLAQPESFLPISVEMISD KIILMGSRFGAIVYFNLDYGLERISHARCWRHIFSLDGIRSLVYDQDKKLLHISSRGGHFGVAELVIDAAKDSLSELNII SENKLPKGSIEGCVLLDNGEKVFWGFRNDLFFIWNETRLYEIANERCGGSHRNWDAIIDRTDPSNYKIIYSKESQVMVVD SYKLSQRQATETFGKHTLIQDGTHGREIRAIKFNPIFNKNTRYRIIATASEDTCINIGILDTKTNRLANKCTMRQHISGI QALKWSKDGQYLYSSAGREEFFIWKVKIQENEQQEMPYIYSKFTSAMPPKTDVADLRIMDFDVCPIYLDTDLVTDLTTDL DYQSELIVSVYSDSGIRIWIHSRATGDITLVGTGQYRTCCIFNCNLIICNSHALLLISSTDGHVVGWELTSTLESLGIQV TDNKLTTTSLTRGDFNSLIELGNYIFRLQTHQSSIKDSIIIPASHTIDNTLSSEFYHIGAGDDNSLCLSLLSFSKGISIK KIFQEYSAHSSTITGLAYYIAPGNKTGVISVGVDQNVNLWILEPDSLKKTETIYTTIADTGCIDIQQHDIMIGGLGLSYW SI
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.