Protein
MCA_03065_1
Length
184 amino acids
Gene name: IMP3
Description: U3 small nucleolar ribonucleoprotein protein IMP3
Browser: contigB:3236935-3237490-
RNA-seq: read pairs 820, FPKM 54.8, percentile rank 67.3% (100% = highest expression)
Protein function
| Annotation: | IMP3 | U3 small nucleolar ribonucleoprotein protein IMP3 | |
|---|---|---|---|
| KEGG: | K14560 | IMP3 | U3 small nucleolar ribonucleoprotein protein IMP3 |
| EGGNOG: | 0PMW5 | IMP3 | u3 small nucleolar ribonucleoprotein |
| SGD closest match: | S000001191 | IMP3 | U3 small nucleolar ribonucleoprotein protein IMP3 |
| CGD closest match: | CAL0000189738 | CAALFM_CR00460CA | SnoRNA-binding rRNA-processing protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05425_1 | 78.92% | 185 | 3e-107 | MIA_05425_1 |
| A0A0J9XAV5_GEOCN | 66.30% | 184 | 3e-89 | Similar to Saccharomyces cerevisiae YHR148W IMP3 Component of the SSU processome OS=Geotrichum candidum GN=BN980_GECA07s04146g PE=4 SV=1 |
| A0A167FVP5_9ASCO | 64.67% | 184 | 1e-86 | Imp3p OS=Sugiyamaella lignohabitans GN=IMP3 PE=4 SV=1 |
| A0A060T3L8_BLAAD | 64.48% | 183 | 2e-86 | ARAD1A16918p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A16918g PE=4 SV=1 |
| IMP3_YEAST | 60.99% | 182 | 3e-79 | U3 small nucleolar ribonucleoprotein protein IMP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IMP3 PE=1 SV=1 |
| UniRef50_P32899 | 60.99% | 182 | 8e-76 | U3 small nucleolar ribonucleoprotein protein IMP3 n=427 Tax=Eukaryota TaxID=2759 RepID=IMP3_YEAST |
| A0A1E3PF03_9ASCO | 56.59% | 182 | 3e-75 | U3 small nucleolar ribonucleo protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_75429 PE=4 SV=1 |
| A0A1D8PRP4_CANAL | 61.08% | 167 | 3e-73 | SnoRNA-binding rRNA-processing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR00460CA PE=4 SV=1 |
| Q6C1C9_YARLI | 53.85% | 182 | 3e-69 | YALI0F17380p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F17380g PE=4 SV=1 |
| A0A1E4TBY4_9ASCO | 24.48% | 143 | 1e-08 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3855 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1438
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
20
40
60
80
100
120
140
160
184
Detailed signature matches
no IPR
Residue annotation
-
RNA binding surfac...
Protein sequence
>MCA_03065_1 MTRKLKFHEQKLLKKVDFHDWEQDKNHQENTITQRYHLTNRNDYSKYHKLCGEIRKFALKLAELDPRDPVRNKHEQLLLQ KLQDMGVLLPTKKPKISDLETQMTVSRFCKRRLPVVMWRLKMAPSIRDATMFVEQGHVRIGPQVITDPGFLVTVKMEDYL TWVDESKIKRNIAKYRQEVDDFLL
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003723 RNA binding
GO:0019843 rRNA binding
Cellular Component
GO:0005622 intracellular