MCA_03057_1

Browser: contigB:3218011-3218791-

RNA-seq: read pairs 175, FPKM 8.3, percentile rank 22.9% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0243

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   255 - 259

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   1 - 235

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. TMhelix
   236 - 255

   TMHMM
   TMhelix (TMhelix)
4. TRANSMEMBRANE (Tran...)
   236 - 254

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
5. mobidb-lite (disord...)
   60 - 79

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   154 - 178

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_03057_1
MGLFSSSSKSKKSLASSSQIQLNETGVIALVRDPSVHSGRTLDSQSSNKSQKKLVGYINSVETREPDDSTSSRSNVVSTS
HQFAPLAPSFSESVRSTASSISESYWADNASFMSAASNDRRSEYSTGSVAASSKSSMACQLNSTGYIPNIYSHSSKRGKS
SLSTSNKLNSISDPSIKSQNSSKTVIYDQSYIEALQKKQSKKRAKEILKATDCKSTPEIENHVNGPELHISGPREWYKEV
FFLFLVIFSTFLLLSTRAR

GO term prediction