Protein

MCA_02982_1

Length
534 amino acids

Browser: contigB:3002319-3003924+

RNA-seq: read pairs 2078, FPKM 48.0, percentile rank 64.5% (100% = highest expression)

Protein function

KEGG:K14775UTP30 ribosome biogenesis protein UTP30
EGGNOG:0PN46PGUG_03548conserved hypothetical protein
SGD closest match:S000001094CIC1Proteasome-interacting protein CIC1

Protein alignments

%idAln lengthE-value
MIA_02545_142.75%3932e-75MIA_02545_1
A0A0J9X791_GEOCN36.23%2766e-38Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA03s04993g PE=4 SV=1
UniRef50_A0A0J9X79136.23%2761e-34Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X791_GEOCN
A0A167DT91_9ASCO26.97%4193e-28Cic1p OS=Sugiyamaella lignohabitans GN=CIC1 PE=4 SV=1
A0A1E3PD91_9ASCO26.55%3541e-24Ribosomal protein L1 (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_8935 PE=4 SV=1
Q6C6E8_YARLI25.50%3494e-21YALI0E10109p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E10109g PE=4 SV=1
A0A060TBR1_BLAAD23.26%3748e-19ARAD1D29194p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D29194g PE=4 SV=1
A0A1E4TJG1_9ASCO41.79%673e-09Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_464 PE=4 SV=1
CIC1_YEAST24.63%2035e-08Proteasome-interacting protein CIC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CIC1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1161

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 250 300 350 400 450 500 534

Detailed signature matches

  1. Family IPR028364
    Ribosomal protein L1/ribosomal biogenesis protein
    1. cd00403 (Ribosomal_L1)
    2. PF00687 (Ribosomal_L1)
  2. Domain IPR016095
    Ribosomal protein L1, 3-layer alpha/beta-sandwich
    1. G3DSA:3.40.50...
  3. Domain IPR023674
    Ribosomal protein L1-like
    1. SSF56808 (Ribosomal...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Residue annotation

  1. mRNA/rRNA interfac...

Protein sequence

>MCA_02982_1
MTSLSYSPSKVTDAVTAFYEFARRKEATLQSEREQAGSQKFNLLSDYADDEHTLPLENFDLVVGTKKILTPKKIAEPVQV
PLPHRFLGKSSADSTPFSVCLLARNLKSAGQNEGKSIEFYNKRVVEATVNEETALAALLAEEEKEKKTKKNKKNSNEIDL
KELAKIKVDRVVTFSQLRTEFKPFQSRRKLISEHDIFFADTALTTADNGVLLPKILGKNFYNSTKTVPQPVNLINPASIK
SEKKDKAVELAIRNKADESTAKKLKTLKNEKDDFKLDLDVPDLSSNFSLKALLTDIYKRLNGTHFMLTPASQISVRVGST
ALSVPEMVENIEATIDYVKDNTIPSKWDGIRGIYLKTSTGPSLPLFISSKPYEDNEDVTEESEDEDEESKKKVSTAQAIH
RRKAEQTVLADSKIEQLLSEVLTEEQFKQLKSSKKSKPTTKKVPEEQKESAKPAKDLKRKLKDEDGDEEMVDAEEKAAKS
PAKPKSTAKKAKPASKPVETPKKQKKSSISGTPTSQKKTKTSEAANGKKKVSKK

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.