Protein
MCA_02948_1
Length
189 amino acids
Browser: contigB:2869904-2870474+
RNA-seq: read pairs 43289, FPKM 2815.2, percentile rank 98.3% (100% = highest expression)
Protein function
| KEGG: | K02940 | RP-L9e | large subunit ribosomal protein L9e |
|---|---|---|---|
| EGGNOG: | 0PI94 | FG01154.1 | 60S ribosomal protein l9 |
| SGD closest match: | S000005011 | RPL9B | 60S ribosomal protein L9-B |
| CGD closest match: | CAL0000184881 | RPL9B | Ribosomal 60S subunit protein L9B |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05368_1 | 82.98% | 188 | 3e-113 | MIA_05368_1 |
| A0A0J9X2F0_GEOCN | 79.89% | 189 | 2e-108 | Similar to Saccharomyces cerevisiae YNL067W RPL9B Protein component of the large (60S) ribosomal subunit OS=Geotrichum candidum GN=BN980_GECA01s00956g PE=4 SV=1 |
| A0A167FXS8_9ASCO | 79.26% | 188 | 2e-107 | Ribosomal 60S subunit protein L9B OS=Sugiyamaella lignohabitans GN=RPL9B PE=4 SV=1 |
| A0A060T794_BLAAD | 78.72% | 188 | 1e-104 | ARAD1B17864p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B17864g PE=4 SV=1 |
| UniRef50_Q75B62 | 74.74% | 190 | 6e-96 | ADL290Wp n=244 Tax=Eukaryota TaxID=2759 RepID=Q75B62_ASHGO |
| Q5AEN2_CANAL | 75.92% | 191 | 5e-99 | Ribosomal 60S subunit protein L9B OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPL9B PE=4 SV=1 |
| A0A1E3PQ43_9ASCO | 71.81% | 188 | 4e-98 | Ribosomal protein L6 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82006 PE=4 SV=1 |
| Q6C477_YARLI | 72.87% | 188 | 1e-96 | YALI0E29073p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E29073g PE=4 SV=1 |
| RL9B_YEAST | 72.77% | 191 | 2e-96 | 60S ribosomal protein L9-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL9B PE=1 SV=1 |
| A0A1E4TCM7_9ASCO | 71.28% | 188 | 7e-95 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_139857 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0100
Protein family membership
- Ribosomal protein L6 (IPR000702)
Domains and repeats
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Domain
1
20
40
60
80
100
120
140
160
189
Detailed signature matches
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PIRSF002162 (RPL6p_...)
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PS00700 (RIBOSOMAL_...)
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Protein sequence
>MCA_02948_1 MKFIQTDQVLAVPEGVTVDIKARIITVTGPRGTLTKNLRHIDVAFSKTEEGEIKITVHHGDRKHVAALRTVKSLIANMIT GVTKGYKYKMRYVYAHFPINVNIINDGKTVEIRNFLGEKLVREVNVRPGVDLEISSNQKDELVLSGISVEDVSQSAADIQ QATRVRNKDIRKFLDGIYVSSKGYIEEDI
GO term prediction
Biological Process
GO:0006412 translation
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Cellular Component
GO:0005622 intracellular
GO:0005840 ribosome