Protein
MCA_02943_1
Length
540 amino acids
Browser: contigB:2859636-2861364-
RNA-seq: read pairs 113, FPKM 2.6, percentile rank 13.0% (100% = highest expression)
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05362_1 | 35.77% | 397 | 4e-57 | MIA_05362_1 |
| A0A0J9XEB3_GEOCN | 26.28% | 274 | 7e-20 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA12s00417g PE=4 SV=1 |
| UniRef50_A0A0J9XEB3 | 26.28% | 274 | 1e-16 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XEB3_GEOCN |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1963
Predicted cleavage: 25
Protein family membership
- XLF family (IPR015381)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF09302 (XLF)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_02943_1 MATDTPPRWNRLAVPGHQLLLYRIDVDQGFYSLFVTNMVDIWMEERVISLKNEDGKYSTDALRKKIALILKKISDSLDPD SLPPVTRSLVQSNNLQNGDSHLLLRVSAPQISSSDSQRKGSNSQQYSQFSSGFNASQQSQRNSQKKEYPPFKWEFRLQPI ESGNPILQTLFQSLILGLIGIVDTLCAQRHELYEIIHRKDINLLDLSEAYGNSTYKPKRYKAEFKKFQKTDWETRWYTSR ISGCDSLANVFDRAMDSAQPVWGFHAIGRHWAGALTIVKNEPPQSAESGQKKTLLMPGKTAVQQASTSSNEDDPFDSFGS PFRSFTKASREGSKNDTQNSNSVKGEIRTLKRKRKVKEGNEEEEDASETDWSGSDDASKEEKKRIKTELPPYKPSQTVDE SGDDILLPSSSPSRLFPRFSQSQPSDPIDLDNLYNPYSSDKDQLESQPYSIPQLNEHYNDESFIDTSTVDIQATTEFHSR NTDNSSSSGSSGPSTPRRSKKTSQPFKVENISHSSMMLHQRLSESPSPKNQNKTGIWTWI
GO term prediction
Biological Process
GO:0006302 double-strand break repair
Molecular Function
None predicted.
Cellular Component
GO:0005634 nucleus