Protein
MCA_02920_1
Length
628 amino acids
Browser: contigB:2783752-2785639-
RNA-seq: read pairs 395, FPKM 7.8, percentile rank 21.9% (100% = highest expression)
Protein function
| EGGNOG: | 0PJ0H | PGUG_00425 | mRNA binding post-transcriptional regulator |
|---|---|---|---|
| SGD closest match: | S000001128 | NAM8 | Protein NAM8 |
| CGD closest match: | CAL0000193463 | orf19.6790 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A161HFM9_9ASCO | 56.81% | 345 | 6e-120 | Nam8p OS=Sugiyamaella lignohabitans GN=NAM8 PE=4 SV=1 |
| A0A0J9X5C1_GEOCN | 53.89% | 360 | 4e-121 | Similar to Saccharomyces cerevisiae YNL016W PUB1 Poly (A)+ RNA-binding protein, abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs OS=Geotrichum candidum GN=BN980_GECA03s00560g PE=4 SV=1 |
| UniRef50_K1Y2H5 | 55.84% | 351 | 3e-108 | RNA-binding protein n=1 Tax=Marssonina brunnea f. sp. multigermtubi (strain MB_m1) TaxID=1072389 RepID=K1Y2H5_MARBU |
| A0A1E4THK5_9ASCO | 48.63% | 366 | 3e-101 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_25868 PE=4 SV=1 |
| A0A060T2H8_BLAAD | 61.58% | 190 | 4e-74 | ARAD1A08470p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A08470g PE=4 SV=1 |
| MIA_03197_1 | 68.42% | 190 | 4e-69 | MIA_03197_1 |
| NAM8_YEAST | 42.42% | 356 | 4e-69 | Protein NAM8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NAM8 PE=1 SV=2 |
| A0A1E3PSJ4_9ASCO | 60.56% | 180 | 3e-61 | RNA-binding domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_14671 PE=4 SV=1 |
| Q6CA89_YARLI | 50.53% | 190 | 2e-53 | YALI0D04917p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D04917g PE=4 SV=2 |
| Q5ADQ1_CANAL | 43.24% | 222 | 1e-42 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6790 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1269
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
628
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd12346 (RRM3_NGR1_...)
-
cd12611 (RRM1_NGR1_...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_02920_1 MYHQQTPSSESNLIRNNSPDSSSIFQHQHHLSTSTYQDSFLPYQQQQQQQQQQQPHDAMNQQQSHYSSDDGNSKSTLWMG ELEPWLDEVAIRKIWSSFRENVNVKLIRDKFTGSNAGYCFVEFSSPAAAARALQLNGQPIPGTQSIFKLNWASGGDNSMN KNSGNSGNSNSNDKSPEYSIFVGDVGSEVSESQLFQLFQSKYPSCKSVKIMTDPQTNVSRGYGFVRFADELEQQRALTEM NGIYCGSRPLRVQPATPKGKNTGTGSQLMMNQNVNGANGGALPGFIQQSAIAQSANSVIAATGNQNKLPFQNNNNIFGNN AAPVNGAAVNVQPLTQYTDPNNTTVFVGGLSSTVTEDDLRRHFSGFGDITYVKIPSGKGCGFVQYVQRQSAEAAITQMQG FPIGNSRVRLSWGRSQNSMNNNNLNANQQQLPMAGGNGMIPNGFNGNMVNANYGSNQVPNSLVNATSTSPGTNNAQPSFL VNGNSALSSNVSNGYHAAPPQGAYPQMAIGPSQGFSGPFGPINPQSAHMHPSIGNRSLISHNPSSSIGDSNFFGTSTGNN NCNPIGFPPQIGVGPSAGSGGLVGSVPGNDPSEPISVDRLNEMYLAAKDGRLDRVAGDGRGYHGVYAQ
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.