Protein

MCA_02898_1

Length
1,084 amino acids

Description: protein with DDE superfamily endonuclease and DNA-binding HTH (Psq-type) domains

Browser: contigB:2689226-2692481-

RNA-seq: read pairs 905, FPKM 10.3, percentile rank 26.4% (100% = highest expression)

Protein function

Annotation:protein with DDE superfamily endonuclease and DNA-binding HTH (Psq-type) domains
EGGNOG:0PQVYFGSG_14035conserved hypothetical protein

Protein alignments

%idAln lengthE-value
MIA_03538_145.93%5538e-135MIA_03538_1
A0A0J9XG26_GEOCN35.36%5911e-97Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA15s02320g PE=4 SV=1
UniRef50_A0A0J9XG2635.36%5912e-94Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XG26_GEOCN
A0A1D8PTV2_CANAL23.15%3243e-08Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR09050CA PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0985

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 600 700 800 900 1000 1084

Detailed signature matches

  1. Domain IPR011991
    Winged helix-turn-helix DNA-binding domain
    1. G3DSA:1.10.10.10
  2. Domain IPR009057
    Homeobox domain-like
    1. SSF46689 (Homeodoma...)
  3. Domain IPR007889
    DNA binding HTH domain, Psq-type
    1. PF05225 (HTH_psq)
  4. Domain IPR004875
    DDE superfamily endonuclease domain
    1. PF03184 (DDE_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_02898_1
MNSLTPSFSKESGYFNDALSKGITNTTLTASKSLAASVSDHNTSSSDPAASASSSSENDSQGSLNGSTSALFVNDKEMRI
SQALHEFKEGASSIRHLSQKYKIPRTTLRDRIKRANITNENASGEERRSKILKSRAKSIMDKKIKDLKLKERDAVIQSAV
DYYQNAQTSNSDTISPDDNSPESKKNVNVSLVSAKFGIARSTLRGRLKGSTSALDKRNQSTSKLSMTEESLLVQWIEKLC
AVGEEVTPSKIRNMSNLIQQYRSSVPSEEETNTSLALPSVSSPLRKPKLVDPESEKRNQICLGWVHGFLSRHPSLIDANG
TVLTLNIIQSLTKSLFTNWFQDLCSRTIAKHLPPENVYVFGSTSLFVSCIYVDNQLQVVPADRLPPQYFTSPQPEEVIDI
ECFSCDAKSLTPYIVVNKDSQYFDNIDLERNDSSKKQLPDDCNNWSFGVYDLQSFSESEIAYNWVSKVFEPSSKLQSNPK
YNRVLIGPESLKKATAGPSFLEYCKKNDIDFLPLPEHTYRELQPHSVSIFGKLKKSLCSKVESYLAKKSNSESNSSEVEF
IPAEDLLQCIADARINSITKSSLSKALKLCGLVPMDANSVIDRIWKPLNDESIEPELPYNYKINIFTTNNLTTESKAVDH
PSNVNSNPTSFVANENEPAQLVSPLRETDLNQPQPSSSKHHKDNRFLNVVIGSGNEKTHANQLNLQSDNTTSHPKTKSTS
IDFLLSKEELSSSSKTSSTSSIVSGGSSGNSCFTSENSPSSSISSSCSASYSQTASLDSSSNYTRSLNQSTLPSLLDLLN
DSHTTKPRSEGLPSISYLQPHNTTRHNTFVTPLPSISSSLTQSSFQYQNTETSPDFMPTRPSNFTQSQMVHHKNPLMEDL
KSPIEEDDIDKDNFPSVLRATTASYDGSSSGFSNNELLLSKPVSIFISHSIGPPLESTKRKRHNSSGSFDEDYEEEEPEQ
YHYNHNSISNNDTKYNEYAKRSNRDQDSKSILSSSSVPNIHSSNTSSFAIPSSSSFLPSTSQKTSLNAPLPSLTSLSLLS
SSSSLSSSTCASITKPAPPPIPSHAHSNQPTLSYLPPNPSFFQK

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0003677 DNA binding

Cellular Component

None predicted.