Protein
MCA_02873_1
Length
1,053 amino acids
Gene name: SWI6
Description: Regulatory protein SWI6
Browser: contigB:2578384-2581546-
RNA-seq: read pairs 2027, FPKM 23.8, percentile rank 46.1% (100% = highest expression)
Protein function
| Annotation: | SWI6 | Regulatory protein SWI6 | |
|---|---|---|---|
| EGGNOG: | 0PGG6 | SWI6 | Transcription factor |
| SGD closest match: | S000004172 | SWI6 | Regulatory protein SWI6 |
| CGD closest match: | CAL0000183437 | SWI6 | Transcriptional regulator |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01064_1 | 47.54% | 955 | 0.0 | MIA_01064_1 |
| A0A0J9XBR6_GEOCN | 45.17% | 952 | 0.0 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA09s01913g PE=4 SV=1 |
| UniRef50_A0A0J9XBR6 | 45.17% | 952 | 0.0 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XBR6_GEOCN |
| A0A1E3PE24_9ASCO | 41.75% | 867 | 0.0 | Apses-domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_28208 PE=4 SV=1 |
| A0A167FLF9_9ASCO | 42.00% | 881 | 0.0 | Transcriptional regulator SWI6 OS=Sugiyamaella lignohabitans GN=SWI6 PE=4 SV=1 |
| Q6CC42_YARLI | 41.24% | 868 | 6e-166 | YALI0C12639p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C12639g PE=4 SV=1 |
| A0A060TE08_BLAAD | 38.42% | 622 | 1e-106 | ARAD1D11814p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D11814g PE=4 SV=1 |
| A0A1E4TJE1_9ASCO | 43.83% | 413 | 9e-88 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30114 PE=4 SV=1 |
| SWI6_YEAST | 32.97% | 543 | 6e-66 | Regulatory protein SWI6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWI6 PE=1 SV=1 |
| A0A1D8PED2_CANAL | 28.63% | 496 | 2e-36 | Transcriptional regulator OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SWI6 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2984
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Repeat
1
100
200
300
400
500
600
700
800
900
1000
1053
Detailed signature matches
no IPR
Unintegrated signatures
-
-
PF13637 (Ank_4)
-
mobidb-lite (disord...)
Protein sequence
>MCA_02873_1 MPQEIPVDSSLINRQVAISQNEGHLINGHLDPNNSYDVAQKQSDHQQHTVDNTQQLDTNDINTSSTSVGSTNSTTTVKTP RRLAIRPATPNRNGGNNIQPATTPNGMAKKAFSELSKTPTSQGWEVSHGPTSSRSASTTPHKRKAQNSNSMTNQTPASRL ASQQKSLQQTYTLSSPMSIYRKQNSPATHSLNQSDISTGLYTATYSDIDVFEMMVDGIAVMRRRGDSSLNATQILKVAGI DKSKRTKILEREILTGTHEKVQGGYGKYQGTWIPYERGVDLCKKYSVYDVLQPLLEFDTRNPAMENTPTKEQAMAARRKH SNQYHPLLLPPPSSSAVPFTHPLQVGSNYNTPLSQSASEALSTLGRAAKIDSQPLPYTGVFQVNDYYNNPNHPNSANRTF QSTPGSAYSGDQSQAQISFSMPANTHNNVLMTPVRGGSQYSDQEPSSKRQRMYHDAGATTTPSSSLNKPFPPDSNATVYQ PDDEYEDIAIDESLIPASNVPLEPLNSSTANFESSKELITNIFLDNTARLVDAFGGDVKPPDITLDVPIDDLGHTALHWA SALGRIPLVKELIKYGANRLRANYAGESALIRAVLVTNNADMHIFPQLLDLLYPTIPLLDKLGRNVLHHIALTAGIKGRT EASRYYLSSLLEWIVRKGSRGQPGSKLSLGSFIKNVVNSKDKNGDTALNIAARVGNRSIAQHLLKIGADATIPNRAGLRP TDFGIRINDPFSKNGHSHHDSDLTYNLPNFKLNGGDDSESKSPADGDEAQKTGLTMTDLELTEKSDAMIQDISNDVKVFL SESQACFRDEYDAKNDEFKQLHINLQKANKVLNDLQARVQHIKYIEQKMRNYETRSRNLERAVMEEDRKFQAEQESQGLS TMPISLDAKFDADQPFIVNFIYQVYDQMKKDKRILHLAPKDKDEKKTSPEPEQDIDLLTLKSASFRNQLKTELINAYKEK SPMVVSEFEHIPKAILKARVRAYRVNQERLENISRDLKSRSIDLEQRFRHVVSMCTGVEESQVDNLLDGLVEAVANDPKE VDMTRIADFLKKK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
Cellular Component
None predicted.