Protein
MCA_02870_1
Length
141 amino acids
Gene name: TAF13
Description: Transcription initiation factor TFIID subunit 13
Browser: contigB:2571610-2572112-
RNA-seq: read pairs 949, FPKM 82.6, percentile rank 75.7% (100% = highest expression)
Protein function
| Annotation: | TAF13 | Transcription initiation factor TFIID subunit 13 | |
|---|---|---|---|
| KEGG: | K03127 | TAF13 | transcription initiation factor TFIID subunit 13 |
| EGGNOG: | 0PPQF | TAF13 | Transcription initiation factor TFIID subunit 13 |
| SGD closest match: | S000004564 | TAF13 | Transcription initiation factor TFIID subunit 13 |
| CGD closest match: | CAL0000183625 | TAF19 | Taf19p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04583_1 | 80.73% | 109 | 6e-61 | MIA_04583_1 |
| A0A1E3PK78_9ASCO | 63.89% | 108 | 5e-47 | TFIID-18kDa-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51106 PE=4 SV=1 |
| A0A060T852_BLAAD | 58.26% | 115 | 4e-47 | ARAD1C26862p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C26862g PE=4 SV=1 |
| A0A0J9XIJ4_GEOCN | 62.39% | 109 | 3e-46 | Similar to Saccharomyces cerevisiae YML098W TAF13 TFIID subunit (19 kDa), involved in RNA polymerase II transcription initiation OS=Geotrichum candidum GN=BN980_GECA16s02452g PE=4 SV=1 |
| A0A1E4TDJ8_9ASCO | 65.66% | 99 | 2e-43 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_19534 PE=4 SV=1 |
| Q6C9N9_YARLI | 59.09% | 110 | 3e-42 | YALI0D09625p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D09625g PE=4 SV=1 |
| UniRef50_Q6C9N9 | 59.09% | 110 | 6e-39 | YALI0D09625p n=15 Tax=saccharomyceta TaxID=716545 RepID=Q6C9N9_YARLI |
| TAF13_YEAST | 40.00% | 100 | 2e-23 | Transcription initiation factor TFIID subunit 13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAF13 PE=1 SV=2 |
| A0A1D8PR78_CANAL | 37.39% | 115 | 1e-19 | Taf19p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TAF19 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0489
Predicted cleavage: 14
Protein family membership
- Transcription initiation factor IID, subunit 13 (IPR003195)
Domains and repeats
-
Domain
1
20
40
60
80
100
120
141
Detailed signature matches
-
-
SSF47113 (Histone-fold)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_02870_1 MSTTNEPTHKRRRRGLFANDLKALLFAFGDVETPNPDTVATLDDILQEYIIDLCYEASRVSKTAHRTKIKVDDFKFAIRK DHKKISRVEELLVLQKEISDAKKIFDDKEGRQLAKKNAAGESKERSKLKNKEKNKVDSDDD
GO term prediction
Biological Process
GO:0006366 transcription from RNA polymerase II promoter
Molecular Function
GO:0046982 protein heterodimerization activity
Cellular Component
None predicted.