Protein
MCA_02839_1
Length
482 amino acids
Gene name: SLU7
Description: Pre-mRNA-splicing factor SLU7
Browser: contigB:2487735-2489184+
RNA-seq: read pairs 1039, FPKM 26.6, percentile rank 49.3% (100% = highest expression)
Protein function
| Annotation: | SLU7 | Pre-mRNA-splicing factor SLU7 | |
|---|---|---|---|
| KEGG: | K12819 | SLU7 | pre-mRNA-processing factor SLU7 |
| EGGNOG: | 0PI74 | SLU7 | Pre-mRNA-splicing factor slu-7 |
| SGD closest match: | S000002495 | SLU7 | Pre-mRNA-splicing factor SLU7 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01786_1 | 52.71% | 461 | 2e-132 | MIA_01786_1 |
| A0A0J9X9N2_GEOCN | 51.26% | 435 | 1e-117 | Similar to Saccharomyces cerevisiae YDR088C SLU7 RNA splicing factor, required for ATP-independent portion of 2nd catalytic step of spliceosomal RNA splicing OS=Geotrichum candidum GN=BN980_GECA05s02892g PE=4 SV=1 |
| UniRef50_A0A0J9X9N2 | 51.26% | 435 | 2e-114 | Similar to Saccharomyces cerevisiae YDR088C SLU7 RNA splicing factor, required for ATP-independent portion of 2nd catalytic step of spliceosomal RNA splicing n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9N2_GEOCN |
| A0A060T553_BLAAD | 59.83% | 117 | 1e-41 | ARAD1B04906p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B04906g PE=4 SV=1 |
| A0A167ERR1_9ASCO | 42.17% | 230 | 4e-42 | Pre-mRNA splicing factor SLU7 OS=Sugiyamaella lignohabitans GN=AWJ20_1981 PE=4 SV=1 |
| SLU7_YARLI | 48.82% | 127 | 4e-35 | Pre-mRNA-splicing factor SLU7 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SLU7 PE=3 SV=1 |
| A0A1E3PTS0_9ASCO | 37.10% | 221 | 1e-27 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81328 PE=4 SV=1 |
| A0A1E4TBU7_9ASCO | 43.48% | 115 | 3e-22 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3856 PE=4 SV=1 |
| SLU7_YEAST | 30.92% | 152 | 1e-10 | Pre-mRNA-splicing factor SLU7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLU7 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9164
Predicted cleavage: 24
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
50
100
150
200
250
300
350
400
450
482
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_02839_1 MSTPRGGRGGARGRGGPSRRGRPQPEIGPDGKEINPYIPRYIANAPWYLEKSDDYLEHQRSHKDKDFKGEWYDNRGQPSS KPAPKKFQKGACTNCGSMAHQAKDCLERPRKIGAGYSGVDLRTDEAVKDIRTTWDSKRDRWNGYDAEEYKKVIERKEEEE RRKEAEKKRLLEEKEQEKARIADDLASGQSKKKSHDDPYGLDSLDYADSNSDLDLDSDDNSKKEAPSTRTLRTREDKAKY LQDLSEDAAVFNPKSRTLRTEEEGTINERGQFIRKLTDKAADHDKMKKIAEKVAETGNANVHLEKGPTAALLQIKTYTEE KKKNDEEKKKALLAKYGGQQYLTKRKPQEIEEAPVEEFVEYDDSGSIKTEKKDEIRKSDVEEADKKVADTPKSIDKVVAN GGPIIPNKYLLEEDAYPGNHKSVWGSYWKDFKWGYACCHSLIKQSYCTGETGRMMYDEDMSRKFLALGNEEDNLKKRRKL DS
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
Cellular Component
None predicted.