Protein
MCA_02837_1
Length
355 amino acids
Browser: contigB:2485009-2486158-
RNA-seq: read pairs 1040, FPKM 36.1, percentile rank 57.9% (100% = highest expression)
Protein function
| EGGNOG: | 0PP6N | FG08870.1 | RRM domain protein |
|---|
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01788_1 | 52.63% | 114 | 5e-29 | MIA_01788_1 |
| A0A0J9X7T5_GEOCN | 47.12% | 104 | 1e-27 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA05s02870g PE=4 SV=1 |
| UniRef50_A0A0J9X7T5 | 47.12% | 104 | 2e-24 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X7T5_GEOCN |
| A0A167EMF5_9ASCO | 50.00% | 108 | 5e-26 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_5213 PE=4 SV=1 |
| Q6C9S9_YARLI | 43.88% | 98 | 1e-23 | YALI0D08646p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D08646g PE=4 SV=1 |
| A0A1E3PSR6_9ASCO | 44.92% | 118 | 5e-23 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_44927 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0322
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
355
Detailed signature matches
-
-
SSF54928 (RNA-bindi...)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_02837_1 MSKEDYSNFEIDLGDDDLFSKSQFSKNSDSQKDSSNNQQGSNLNNSESNKQHQQFNKQSYQGGSGNFNSNQNKQQNFYNN NNQQSYYNHNNNMNNNNNNNNNGTNNPINYNNPNKSFTPTSAVIIESLNWWVNEEEIRGWVVDVGFETDIKDVIFDEHKV NGKSKGIVYIELASVDQATKLKKHIEEDVSKDSTLSSGNGILVSYMNPTPSPFRPLNKSFNKDNHSNNYNNNNNNYNNNF RGGFRGRGGYNQRGGHGYNNNHYHHNNNNNNNQGMNPMSAMGSGGMSMNMMGGFPSMGNQFGMMPNANARGSYPNFGMQG GYGYPGMFNGNTMGGGNSQGGTDDSQPGQKRQRQE
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.