MCA_02833_1

Browser: contigB:2478814-2479897+

RNA-seq: read pairs 37, FPKM 1.3, percentile rank 10.0% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1195

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   60 - 326

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)

   1 - 15

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   351 - 360

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)

   35 - 39

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. TMhelix
   328 - 350

   TMHMM
   TMhelix (TMhelix)

   32 - 54

   TMHMM
   TMhelix (TMhelix)
4. TRANSMEMBRANE (Tran...)
   16 - 34

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)

   40 - 59

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)

   327 - 350

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
5. mobidb-lite (disord...)
   66 - 118

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   228 - 266

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   183 - 214

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_02833_1
MTSCQITKKKKKKTHFSNITLVLLTEYTISRIYWLTIYTFYIELAFLLIEYGYFGYNIYKGHYSREGQKNTSNSPSTSSN
NSLSSRSPLSGESSKKKYNRRKATRRYDPGRSPCRFTPSPTFSPLYNFRENMSNNGSPGSPLRQLFEINNDRELSPNMNS
PLYSEVNSAATTATITAYPLITTEEMAGDDDDNGSEKDGYQEDSENEDVTPTPDSIRKSMLRQMQKFNKKHANSGSNNKK
SKRRHQDNGKRKKRKHGYLNGKYDEEFNNDDNVERLKSSNDDYSCNDSLLKRFDSLKLTFDSEPFAQSSPLYVESMFYLV
YNGGTQLVWDIIVPTLHFFSCIVSIVWMYLYSDYYLSKHI

GO term prediction