Protein

MCA_02825_1

Length
478 amino acids

Description: protein with DDE superfamily endonuclease and DNA-binding HTH (Psq-type) domains

Browser: contigB:2462736-2464173-

RNA-seq: read pairs 807, FPKM 20.8, percentile rank 42.5% (100% = highest expression)

Protein function

Annotation:protein with DDE superfamily endonuclease and DNA-binding HTH (Psq-type) domains
EGGNOG:0PQVYFGSG_14035conserved hypothetical protein

Protein alignments

%idAln lengthE-value
UniRef50_B6QI1327.86%4024e-33Uncharacterized protein n=9 Tax=Talaromyces TaxID=5094 RepID=B6QI13_TALMQ
A0A1D8PTV2_CANAL24.80%3791e-23Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR09050CA PE=4 SV=1
Q6C7B4_YARLI26.87%2942e-20YALI0E02178p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E02178g PE=4 SV=1
MIA_01692_121.53%3533e-17MIA_01692_1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0434

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 450 478

Detailed signature matches

  1. Domain IPR007889
    DNA binding HTH domain, Psq-type
    1. PF05225 (HTH_psq)
  2. Domain IPR004875
    DDE superfamily endonuclease domain
    1. PF03184 (DDE_1)

Protein sequence

>MCA_02825_1
MPTNEEKLEKAIAQCLDPKNKISIYKVSKLHGVDYRTLKRRVNGGRSMKQAAVDARLLSPEQESILEARIIFLCLCNMAI
SGPMVREMAGKMTRRPENFTPARNWLTAFFKRREYLTYTRAGKIELNRRRDGPVHLINLFFELYEHFIKKFNVAPNNIWT
IEECGVQIGDTMEKCNIVAHQNARNVASYDTREQVTVLELISATGTVGDPLFTYKGEQLMESWFPKDVGEPGYAASSDSA
SINKELFMDWFRQCTSFADSDSNVWKILLLDGHPSYTQNRFFNLAISRKFIPLFFPTHVTHILELLDTVPSSVSGQLQRE
AFDFEFSKGWTTNQKMFFETYFPVRRAAFASDEIKNAFQKAGLAPLDREIAMSRIKNQHNLDFAVVESPVDEQPVQEDDD
DSDAEDLSKISTEILSMTWRSARATLLRLGWSLEQINIYQAVWRLHSELQTKMAYMKRNEARIQKPAICPKCKRKQGE

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0003677 DNA binding

Cellular Component

None predicted.