Protein
MCA_02817_1
Length
380 amino acids
Gene name: RRP1
Description: Ribosomal RNA-processing protein 1
Browser: contigB:2449263-2450406+
RNA-seq: read pairs 778, FPKM 25.2, percentile rank 47.8% (100% = highest expression)
Protein function
| Annotation: | RRP1 | Ribosomal RNA-processing protein 1 | |
|---|---|---|---|
| KEGG: | K14849 | RRP1 | ribosomal RNA-processing protein 1 |
| EGGNOG: | 0PH7N | PGUG_01308 | ribosomal RNA processing protein |
| SGD closest match: | S000002494 | RRP1 | Ribosomal RNA-processing protein 1 |
| CGD closest match: | CAL0000174798 | orf19.6828 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01789_1 | 60.35% | 343 | 5e-117 | MIA_01789_1 |
| A0A0J9XCE8_GEOCN | 66.29% | 175 | 2e-77 | Similar to Saccharomyces cerevisiae YDR087C RRP1 Essential evolutionarily conserved nucleolar protein necessary for biogenesis of 60S ribosomal subunits and processing of pre-rRNAs to mature rRNAs OS=Geotrichum candidum GN=BN980_GECA09s00967g PE=4 SV=1 |
| A0A167EME6_9ASCO | 55.09% | 167 | 7e-65 | Rrp1p OS=Sugiyamaella lignohabitans GN=RRP1 PE=4 SV=1 |
| UniRef50_A0A167EME6 | 55.09% | 167 | 2e-61 | Rrp1p n=2 Tax=Trichomonascaceae TaxID=410830 RepID=A0A167EME6_9ASCO |
| A0A060T4P6_BLAAD | 59.17% | 169 | 1e-64 | ARAD1B04950p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B04950g PE=4 SV=1 |
| Q6C9S8_YARLI | 51.61% | 186 | 2e-61 | YALI0D08668p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D08668g PE=4 SV=1 |
| A0A1E3PSD8_9ASCO | 48.24% | 170 | 5e-51 | Nucleolar (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_12873 PE=4 SV=1 |
| A0A1D8PKJ8_CANAL | 39.88% | 173 | 8e-35 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6828 PE=4 SV=1 |
| A0A1E4TBT2_9ASCO | 36.90% | 168 | 2e-35 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_14591 PE=4 SV=1 |
| RRP1_YEAST | 40.86% | 186 | 1e-31 | Ribosomal RNA-processing protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP1 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.4841
Protein family membership
- Nucleolar, Nop52 (IPR010301)
Domains and repeats
-
Domain
-
Domain
1
50
100
150
200
250
300
350
380
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_02817_1 MGKHQTTSAAKKKLDPSAKKAKRSVQVSKKPDLTPNSAKSASFHPQTHPFVKNLADNELKKREDALKALKLFLQTPKEIP SMELLKLWRALFYSMWLSDRPLTQQQLADNLASLVEVVKPINFSTFLDAFWVIMAREWEGLDRYRLDKFYLLLRRYHAAS LRRLLQEDWDEDWVSDYVQIMQHIPLNLENIKVPNGIRFHMFDIYLDELERVLKENDPKFAKGLKLLPSTVPEGAESIKP EFHTVDSDGEEESDSDESDSDDDDDDSDSEEDEGYIEETEEQKLEKKTKEQQEAEEKQAQLMNDWKLLAEKIKDTNVPLK TLLEPVERLAKQSPYSIVRKAAQEVLDDPRLIIWGVTEPPSDKEDEDEDFDDEEEFTGFD
GO term prediction
Biological Process
GO:0006364 rRNA processing
Molecular Function
GO:0005488 binding
GO:0005515 protein binding
Cellular Component
GO:0030688 preribosome, small subunit precursor