Protein
MCA_02814_1
Length
397 amino acids
Gene name: PRP18
Description: Pre-mRNA-splicing factor 18
Browser: contigB:2445600-2446794+
RNA-seq: read pairs 397, FPKM 12.3, percentile rank 29.8% (100% = highest expression)
Protein function
| Annotation: | PRP18 | Pre-mRNA-splicing factor 18 | |
|---|---|---|---|
| KEGG: | K12817 | PRPF18 | pre-mRNA-splicing factor 18 |
| EGGNOG: | 0PK4K | PRP18 | splicing factor |
| SGD closest match: | S000003238 | PRP18 | Pre-mRNA-splicing factor 18 |
| CGD closest match: | CAL0000183835 | orf19.2112 | mRNA splicing protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01791_1 | 44.29% | 280 | 1e-55 | MIA_01791_1 |
| A0A0J9X8I7_GEOCN | 46.08% | 204 | 3e-49 | Similar to Saccharomyces cerevisiae YGR006W PRP18 Splicing factor OS=Geotrichum candidum GN=BN980_GECA05s02848g PE=4 SV=1 |
| UniRef50_A0A0J9X8I7 | 46.08% | 204 | 7e-46 | Similar to Saccharomyces cerevisiae YGR006W PRP18 Splicing factor n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8I7_GEOCN |
| A0A1E3PPA1_9ASCO | 45.10% | 153 | 4e-33 | mRNA splicing factor OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_22200 PE=4 SV=1 |
| A0A167BZQ1_9ASCO | 38.14% | 194 | 2e-29 | Prp18p OS=Sugiyamaella lignohabitans GN=PRP18 PE=4 SV=1 |
| A0A060SWP7_BLAAD | 31.86% | 204 | 7e-26 | ARAD1A06908p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A06908g PE=4 SV=1 |
| Q6C1J2_YARLI | 30.85% | 188 | 3e-23 | YALI0F15807p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F15807g PE=4 SV=1 |
| A0A1D8PG11_CANAL | 40.48% | 126 | 1e-22 | mRNA splicing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2112 PE=4 SV=1 |
| PRP18_YEAST | 43.66% | 142 | 3e-19 | Pre-mRNA-splicing factor 18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRP18 PE=1 SV=3 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2366
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
397
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
SSF47938 (Functiona...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_02814_1 MDFSELLKNEISKKKAAVDHALAQSSSFSAKSVKNSDLLLAEQDLHYQELKAKRKHSSSQDIEEDDEEYQRKRRERREQQ IKQFQQEKENKKKLQEEKTAISQLPESSLTNAQLVDQLKSRKIEIELSELQPPEKGSKESDSMAHEWARIKAIKKLNKLK KRELINKHLKLENSIPLTIKEEDIKTNKERVSVQMCAIIRTILGEWRAYLETHPHEQNDDDNKTFETTSAQNLNKAEQDA NSPAYILKQTVAYFKPLLLALRSNTLSDSQYLKIARILRHIQRHEFHLANSVYIQLSIGNAAWPVGVTAVGIHARSAREK ITGEQRRKTAKDSSGNGEVVDDGVDLANIISGEEDTRNWIVAVKRLITFSEAHLSKKKIVREGEEENEEENSSGKDE
GO term prediction
Biological Process
GO:0008380 RNA splicing
Molecular Function
None predicted.
Cellular Component
GO:0005681 spliceosomal complex