Protein

MCA_02810_1

Length
1,885 amino acids

Description: protein with Zn-finger SWIM-type and PMZ-type domains

Browser: contigB:2433607-2439326+

RNA-seq: read pairs 320, FPKM 2.1, percentile rank 11.9% (100% = highest expression)

Protein function

Annotation:protein with Zn-finger SWIM-type and PMZ-type domains

Protein alignments

%idAln lengthE-value
A0A0J9YHD5_GEOCN23.53%4083e-14Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA01s02749g PE=4 SV=1
UniRef50_A0A0J9YHD523.53%4086e-11Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9YHD5_GEOCN
MIA_04131_123.47%3925e-09MIA_04131_1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0158

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 200 400 600 800 1000 1200 1400 1600 1885

Detailed signature matches

  1. Domain IPR007527
    Zinc finger, SWIM-type
    1. PS50966 (ZF_SWIM)
    2. PF04434 (SWIM)
  2. Domain IPR006564
    Zinc finger, PMZ-type
    1. SM00575 (26again6)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_02810_1
MSGAGFYTYETPRDYYHVLQPNEELILGDIRARMGDLTWQNPELLLSAISKQHYGPQNEKCPELQIESLDEQDISIIDQF
SSTFRQFFIEVFLSKHSRDIQLSIQELANSFLSFLLVIFEQQADVNQDFVRAQMIAAITKSSENIHNYLYNSTAGAYNRK
LVASKLFHIFNCLINSSRYLNTNLGSKFCKNYTGNNTVFAIHETLSGIIGPFLPPENILNIITGDEPSHDDVDSLFTLAK
YTIPRLASTTAHNFIQKKSGRVESQKAGDYESVHIIEEIREIHNIFLNMEKPDYILISKYSNALRKYLPLNYTNTFAAVQ
IHDLPCFAHCKAKLLGFQILWNLLNNKLPYIDRNAINTNYYGSATAVLRCVKKNCDYQVHCKKVRITELLEHPFEFWYVE
TFVDHTCASTTLEESKKLKNLMELYSDKKIDCETNMSPKDIINAFLSKNEDSIPDTQKSRNVYNIIKDAFEIFKQNKSAL
NLFSHSLLEYLAYTMNPSFFNMSPEAKKSVANSLAKLFSHHPKYVDIANDEDKISKIFLTKTIRHFRKANRLIGDVFTIL
LKILQERPGCYFVIQYDCFDSDGTVSCENQKTSKSLLSHQRESTKGGCGRPPDSTNNKRINSKIKENSQKRKREKISNNS
SPIPASKRHCSTDATIRNLPNTESLQIQSNFNNVTSNPSEITYPEAFKAFYSTKSQVIPKLKQNDDEIFDSDNYGGSDLE
FDIDNVSDEEFVYKCSSYSPKHVFDRIPKEQASHSTENENRPHDDDGFITNEYHVVVTEEHSDSIGSQPPDTMTVEHNDS
TGNQTIASSRRETAQFFIEQCVNNPSKNGIAFHYTPGQATAPPGLTEPGSKKYNGSQDNFDVNCEFFRNKSALVTPNGTE
YISKEVKYEPLFQKGEAPFRNRGRLQFRMFFEISNPSTPQAVAKDLSPPSVVEASLSDISTLVSEVPLPVSSSSLSPISS
DVEVESIFLDDEGLSPISTSSGLEVSSTSPYTEMTAKLKKRSDSFYYPNLKPDCVKDEVFSMNISDSEDGITVECQRRNK
NKNKNRKNSPAFCDMHQKLKDARILTDMQNTPEELMNEIEERLKDFERAEKSSSINHKIYMRYKMGKGNANSLCTLKYVD
SDFTLMDYDPISYDSNILIKPELVAIPADDDGWVDFPPDFDYPPYVYDPSSVNDISNINNNPHDFIHPLDDVIIKGRNGT
GKSFMRVPSAKADKPFLLKTRNNIRSITRLKMKGKLHSKIWSNSTYCQIYQCEKLGHSIKAENDRFLKQKKKRKEGEELT
PPRPPATCGVISHDISEMLFNIMKVFPIDPLKLGQTFSKIFDKFDQQIFAAMSKFQLPYCPTEVFYVPDISRDFVKLVTP
VIALNATTLKKVAYGDYTLYLATATTSNNVCIVLAMGIYLKENIVGYQAFLTNFYHVYKDYFHESNPSIISDDNKGLPSS
AVLSILPDTIHYNCYKHMSERIRKLNFGNKRKVRNRFISLFHRLQSTTDPYYAQFYYNELMQIISNYDINDDLINYIKDA
TRFVFAFSETSRTNQLTSYSAKEASLAILGTKYKGPWEIIMRINEMVAAQVETEISKKYFVGRLAGCFVNDTVYLLPGII
SNLSHMIMHKDEYFSYRSEDEEDVYTVLPSEKSVLKFFILNSSPTFRPSQFPGLYHAYNKPFGQPPTVTKERRIDDAHSK
TQYTVDLGKHTCTCTYFQQLQYPCVHALSVIMHLKRPVSKYCHERFHYETALPIYRKYVGKYRNKTKFPAQEILQVKDLV
SKVPVSHKYGLSCLIKNEERKIFMKHNMVQKKIMKLNFELNRMTKKINLQRASLDKYDNTNSDDTIVEQLNKLISDTQAI
NKGNGDNDYHSEQSQEEENEDNDEDNNDNDYDYYYDDDEENQNDE

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0008270 zinc ion binding

Cellular Component

None predicted.