Protein

MCA_02748_1

Length
3,144 amino acids

Browser: contigB:2248912-2258621-

RNA-seq: read pairs 4661, FPKM 18.3, percentile rank 39.1% (100% = highest expression)

Protein function

KEGG:K19525VPS13A_C vacuolar protein sorting-associated protein 13A/C
EGGNOG:0PH81FG10530.1Vacuolar protein sorting-associated protein
SGD closest match:S000003963VPS13Vacuolar protein sorting-associated protein 13
CGD closest match:CAL0000187466VPS13Membrane morphogenesis protein

Protein alignments

%idAln lengthE-value
MIA_03512_173.20%31940.0MIA_03512_1
A0A0J9XDG4_GEOCN64.07%31730.0Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA10s03101g PE=4 SV=1
UniRef50_A0A0J9XDG464.07%31730.0Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XDG4_GEOCN
A0A060T8M0_BLAAD52.93%30530.0ARAD1C29854p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C29854g PE=4 SV=1
Q6C2L6_YARLI43.95%32740.0YALI0F06791p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F06791g PE=4 SV=2
A0A1D8PMH5_CANAL41.87%31980.0Membrane morphogenesis protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=VPS13 PE=4 SV=1
A0A1E3PCV6_9ASCO48.19%23510.0Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_80833 PE=4 SV=1
A0A1E4TEL2_9ASCO37.59%32670.0Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_1934 PE=4 SV=1
VPS13_YEAST37.16%32430.0Vacuolar protein sorting-associated protein 13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS13 PE=1 SV=1
A0A167EV22_9ASCO50.38%13260.0Membrane morphogenesis protein VPS13 OS=Sugiyamaella lignohabitans GN=VPS13 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1242
Predicted cleavage: 22

Protein family membership

Domains and repeats

  1. Domain
1 500 1000 1500 2000 2500 3144

Detailed signature matches

  1. Family IPR017148
    Vacuolar protein sorting-associated protein 13, fungi
    1. PIRSF037235 (Vps13_...)
  2. Domain IPR026854
    Vacuolar protein sorting-associated protein 13, N-terminal domain
    1. PF12624 (Chorein_N)
  3. Domain IPR031646
    Vacuolar protein sorting-associated protein 13, second N-terminal domain
    1. PF16908 (VPS13)
  4. Domain IPR031642
    VPS13, repeated coiled region
    1. PF16910 (VPS13_mid_rpt)
  5. Domain IPR009543
    Vacuolar protein sorting-associated protein 13, SHR-binding domain
    1. PF06650 (SHR-BD)
  6. Domain IPR031645
    Vacuolar protein sorting-associated protein 13, C-terminal
    1. PF16909 (VPS13_C)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_02748_1
MLESLVASLLNRFLGSYVKNFDPKQLNIGIWSGDVKLRNLSLKREALDQLKLPIDVVEGHLGELVLQIPWSNLKNKPVKV
LIDNVFLVAVPKLEQEYDVKEEERRAQALKLSKLEDLEISDSLREASDLSPEETRKNQSFTDSLVTKIIDNLQITIKHIH
IRYEDSTSVPDHQFSIGVSLEELSAVSTNDKWEPSFIQDTKSVTHKLATLNSLSVYWNTDSESICNSDLEEIIDYMKKSA
QSGQDITKDFQYILRPVSGVGQITLNKDVRAGPKTKALLSFDELAFIFDSEQYRDMLWAVELYNVYQRTREFRQFRPTVP
VEKDPKEWFRYAAKCVLDQVHKKNREWTWDYILTRRKDRNRYIELFKKKTISPPLPIEESAEFDELQEKYSFEDLRLFRT
MAKSQMRKEKALTKPEKTAQPETNTWSSWIWGAKKSNDEGEEGKEENTDEVVMTEEQRQELFDAIEWDEQQAIMESIDLP
RDTITMEVNASLKSGSFRLRKNPHGDVKDVVTLLFNGFTSTFHNRPDSYLANVSLQELRVDDGSENTLYKQVVTVKSISP
DILPDLHSADCSDSEEELPVPTGADENAFFWLSFESNPLDGTADSNLFIKMKSITVFYNTQFIENVFRFFKPPKTHLETI
ETIMNVAGATVEEIRDQTRIGLEYALEQHHTVNLKLDMQAPLIVIPLDVNSWSSPCAIIDAGHISAVSHLVGKEVIEEVN
KKKAMVYTDSDWKRLESLMYDKFNVQLHNTQFLIGSNVRDTMRQLHNGISDGPSSVLDRINMNFVVEISILPEAHSLTKF
KVSGNLPKFVCSMSDVKYKIMMQLVDVCIPNFNFDLDGDEDDQKSIEDHSPLIRARSFSVSNPDKNIYDFDGSDSEAETL
TPEVATKAVEQKIFEFKFTVDIVQMFLYRCTDAQTLEQEPLVDMSLKSFDLYYYYKDKEMFADVVLKSLAIEDYVQKNVS
PELRKFATSLETGEESEALFKVKYKRINTGKTDNLGNQINDQEVDVSLSTLKFVVSPKSFLTILDFVITTFTNPEATPPP
PSPASEEDDFVAVPSNDPNDYVAKIDVKVELHGIILLLNDDGIKLATATLEHAYVNVFMIPETMKVEARIGNLSLHDEVN
DGTDRDSMLRKLISIEGNDLADFKYQTFEPGTNQYNSSIYFHAGSIRMNVVEEPFANIVQFGSKFAQMKALYDSARQVAY
NQANQIEDANKIHFDILINTPILVFPRLATLSDEDELKYDTIVAHLGEIYMNNEYIHFPEDPKGPLANHVLFGIRSTKLN
SKIHFADCVQSLDIIDNLDMSFDVSYVEPYKGISRPITVASGNLTETEIKITELQYRFLMEVSSIISGIFVGEGGMQEDE
MDELEEELKQQKHIDNVGISRSLISTDDYNVSKLDFSFDVKRLALTLYNNTVNLPSEKLEKASLSRFTLADLGLQLRMKA
NNVLESDIHIKAFTVHDTRSVKDNKFSEIIPSATHSEYQFMCNVTMTGPEDDRLLKAILTVDSPRMILAMDYLFALKSFI
DYGFFSEDDATEAISPDNQLTTGLEGNIDDVFNQEPEASKSAMKVHYHINVVDASVIVLANPKLIDSEAIVFKAEHFVLS
QEATMVISVSKVGVFLCKMNAFDKNRLRILDDFSLVTTIDSRGSSPNAEISKIELAVEPLVLRLAVRDIILALDIIKRAN
VMSSEVEAQKEVIKETPRYSRFAKKKKERRSSISTKKSNALTRKPSNSNRKNSISTVANVIARGQTLIAEFDGLRLVLIG
TFNELPMLDMCAKAFTVNVRDWSSNLTVETSIETFVNIYNSEKSAWEPLIEPWDLGFHVARSVENNNTSINVFSRKTMEL
TLTTQTIGTVSRAIEFINDDIDDDFLLRPRDDVAPYKILNQTGYSIEVWIDGDHADSSKTTVVKDGESIPWRFYDWNTVR
ENLSTDAQRVNLGVRLLNSPYESVRNISVTTVGEHLYTLYPKIQRVSHRLLCEVSMDDSLKRIVIRSALCVENQTQAPMI
IAVGRDQPGLEWEIQPGEKRAIPIEYMYDKSIYVRPFRHLKFDWSEKPIFWKNLLKGSESITCHPESKNSETKFFVQAAA
VYDESLPLTKVYPHMKIVLSAPVEIVNLLPFDFSYRVYDKTARKEWTNIIQQGKTGSVYVVELSHLIMINVHPQEAGYDK
SDFAVINSNGGDFPIEDTLVTRSADGQRLTIKLHYIKEKGKGIKVQVYAPYIVLNKTGLDLKISEKFNTAISKVTNRTEI
INGKDIVHKHALPKMWSFENENNKRALIKVGDSKWSEEISFDTVGKDSDVVIQSNTRQSEIHIGAHISEGQGMYKLSKIV
TLTPRFIVHNKLEDDLQVRDVGSSVPITVKAGENQPLHFIRRSSNMQLVASFFGSSSQWSAPFIISNIGRIHLRTYQHGK
GYLLLKIDILMEDATLFIHIEEAKQNWPYSIRNFTNRPFKFYQANPYVDDSGIELPRHPQFSPIMYLIPPKSVMPYAWDY
PAAPLKELVIEANGRERRVQLAEIGNLQPMKVPAGNGQSAGIIDLNVVADGPTQTLVLSDYDPSVSLYKLSNNSGSQSSV
ASGTSNTNDSFTVQDDIEDDVTMNVTVRFEGLGLSLINKRMQELCYITLRGIEFNFKTSELFDTFNIKMKWMQIDNQLFG
GVYPIILFPSVVPQTGKEMDTHPTFSASLTRVRDNNHGVLYIKFLTILLQQITLEMDEDFLFALIEFFNAYIEGQKTHID
KLCDTELHIPEPLNDTDGLDLYFELLNLQPAQMDLSFVRTEHVNVEEKTQSQTAIGFFLNALTMAIGNINDAPVRLNALV
MENVRTPFPLLLQSISAHYRQEFMYQIHKILGSADLLGNPVGLFNNISSGFMDMFYEPYQGFIMSDRPQEFGISIARGGL
SFMKKTVFGFSNSISKVTGSISKGLSAATMDRQFQDQRRIKKGRNRPKHALYGFASGANSFVDGITSGVTGLALAPVRGA
SEEGAAGFFKGLGKGLIGLPTKTAIGIFDFANSVSEGVKNTTTVFDGNTIDRIRPARYIAYDGIVRPYNQRDAKGQAWLK
MANNGEFFNDKYLAHLSLAENEMVVMVTFMRIMLLNVSTMNTEWEVKFRDLQTIAMERTGLALVLRGGVQGPFIPITDVV
SRKYMYKEIGIAVSEYNRKYQTLV

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.