MCA_02723_1

Browser: contigB:2172073-2172802+

RNA-seq: read pairs 372, FPKM 18.9, percentile rank 40.1% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1817

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   242 - 242

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   19 - 222

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 18

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   14 - 18

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   5 - 13

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 4

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 18

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TRANSMEMBRANE (Tran...)
   223 - 241

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
9. mobidb-lite (disord...)
   84 - 109

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_02723_1
MIFNLVSTVFALATLASAVPVPVDNEPSTQYATVYYSSTIVDPEIETVSVQPSTFTSTITSILSTSSAFTPVTLTHTSTI
TSIIPTSSTSSSSASSSSANSEEVDDDEEPLTYTSTITHIVVSATHDVESLSTLDDEWEIETQTVTRTIVSTTTLPESSS
TEEVDVAAVIEPSAVSSSHTPKPTLVHIHGHKSNDTVVAINGTIPSTTAPVAPVPTNGASLNLAGPILYYSLGLIIAIQF
LF

GO term prediction