Protein

MCA_02716_1

Length
286 amino acids

Gene name: SLD5

Description: DNA replication complex GINS protein SLD5

Browser: contigB:2147177-2148249-

RNA-seq: read pairs 271, FPKM 11.7, percentile rank 28.7% (100% = highest expression)

Protein function

Annotation:SLD5DNA replication complex GINS protein SLD5
KEGG:K10735GINS4 GINS complex subunit 4
EGGNOG:0PMSFSLD5DNA replication complex GINS protein SLD5
SGD closest match:S000002897SLD5DNA replication complex GINS protein SLD5
CGD closest match:CAL0000200542SLD5DNA replication complex GINS protein SLD5

Protein alignments

%idAln lengthE-value
MIA_04236_154.04%1983e-74MIA_04236_1
A0A0J9X2H8_GEOCN49.25%1992e-63DNA replication complex GINS protein SLD5 OS=Geotrichum candidum GN=BN980_GECA01s01847g PE=3 SV=1
UniRef50_A0A0J9X2H849.25%1993e-60DNA replication complex GINS protein SLD5 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X2H8_GEOCN
A0A167EC91_9ASCO49.53%2122e-61DNA replication complex GINS protein SLD5 OS=Sugiyamaella lignohabitans GN=SLD5 PE=3 SV=1
A0A1E3PF99_9ASCO45.00%2002e-53DNA replication complex GINS protein SLD5 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_27754 PE=3 SV=1
A0A060T6I4_BLAAD42.44%2053e-48DNA replication complex GINS protein SLD5 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B16016g PE=3 SV=1
SLD5_YARLI37.44%2039e-40DNA replication complex GINS protein SLD5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SLD5 PE=3 SV=1
SLD5_YEAST35.71%2385e-32DNA replication complex GINS protein SLD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLD5 PE=1 SV=1
A0A1D8PU96_CANAL35.09%2282e-31DNA replication complex GINS protein SLD5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SLD5 PE=3 SV=1
A0A1E4TBP3_9ASCO30.54%2037e-28DNA replication complex GINS protein SLD5 OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_28760 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0639

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 250 286

Detailed signature matches

  1. Family IPR008591
    GINS complex subunit Sld5
    1. PIRSF007764 (GINS_Sld5)
  2. Domain IPR021151
    GINS subunit, domain A
    1. SSF158573 (GINS hel...)
    2. PF05916 (Sld5)
  3. Domain IPR031633
    DNA replication complex GINS protein SLD5, C-terminal
    1. PF16922 (SLD5_C)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF160059 (PriA/Yqb...)
  2. cd11711 (GINS_A_Sld5)
  3. mobidb-lite (disord...)

Residue annotation

  1. tetramer interface...

Protein sequence

>MCA_02716_1
MDESSSNFHSDSSNRFNSSSSFARGHNGRGSSLAPTSPLPDSDLDDLINKLDHNVRHERPHASSSSNRYSSRSQAATDFN
ISVNQQLQNDMKRLKQIWIAERTAPEILDFEESLINRMIERIQHQMEYIEVNSMNLGQHPDTKLKLLIVETELERVKFLI
RGYLRQRLAKIDKFALYLISEPSQQTRLSPDELEYMHAHNHMLTRLLQTEFLNKLPDELQYLNDMNDVPMVETPDFEKVV
FIRVLENIDYSIRVGMEDIMLEKGGIYSLRYRSVKELLRIGSVELI

GO term prediction

Biological Process

GO:0006261 DNA-dependent DNA replication

Molecular Function

None predicted.

Cellular Component

None predicted.