Protein

MCA_02698_1

Length
586 amino acids

Description: protein with DDE superfamily endonuclease and DNA-binding HTH (Psq-type) domains

Browser: contigB:2087616-2089377-

RNA-seq: read pairs 1110, FPKM 23.4, percentile rank 45.7% (100% = highest expression)

Protein function

Annotation:protein with DDE superfamily endonuclease and DNA-binding HTH (Psq-type) domains
EGGNOG:0PQVYFGSG_14035conserved hypothetical protein
CGD closest match:CAL0000183805orf19.4918Uncharacterized protein

Protein alignments

%idAln lengthE-value
UniRef50_A0A066XBR125.19%3931e-15Putative transposase n=4 Tax=Hypocreomycetidae TaxID=222543 RepID=A0A066XBR1_COLSU
Q5AL59_CANAL22.07%3674e-18Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4918 PE=4 SV=1
MIA_01692_123.45%3542e-15MIA_01692_1
Q6C7B4_YARLI24.70%3364e-11YALI0E02178p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E02178g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0536

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 586

Detailed signature matches

  1. Domain IPR011991
    Winged helix-turn-helix DNA-binding domain
    1. G3DSA:1.10.10.10
  2. Domain IPR007889
    DNA binding HTH domain, Psq-type
    1. PF05225 (HTH_psq)
  3. Domain IPR004875
    DDE superfamily endonuclease domain
    1. PF03184 (DDE_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_02698_1
MKESETGVIQKAIDEYNSSNGSTSAAAIARKYGIPPSTFYNRLHGKTHAQSHHDGRFHFSDHTESLIEAFLVYLIFQSIP
LDLELTAEIAAKIGGVDHLSLSWVKSFVRRSQFLVITDSLHLDVSQVVEDEENEQESIEQFFKIYNFYAKKLKVKPENIW
NLDETSFHFGKIPRHDKPVSDKVDTDGDAESLNLSETITVLEPMSQTGELGPPLFIFNDSNIAQDSFSLNDKTSYGVATT
DSGFINEDLFLSWITTNFGSSKVKEDTPWKILLMDGRKTHTLVKVMNCLVDMHIMPIYFSALMSIPQLLDSTCFGVVKRK
LKNNLETKVFNETVQSKPQFVDTYLKEREASFTKECLIKAWGEIGMLDTDLSIAFKKLQRRINKKALSSASDGYDDDDDD
DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDDEDDDDDEDDDDDEDEDVVIVGASEHLGRLQIPESPKTAQHASFS
STAESIIQRVEKLMDKLPSTEKAPSNKPDSIEKLVREISLAESELIQTEQEREKWKRSVTTLEQKLESLDRDDQEDEDLP
TKVVPQKRKLHPEHFKLVYINKEGSN

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0003677 DNA binding

Cellular Component

None predicted.