MCA_02666_1

Browser: contigB:1997413-1998733-

RNA-seq: read pairs 28, FPKM 0.8, percentile rank 8.3% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0350

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   439 - 439

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   22 - 416

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   17 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   6 - 16

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. TRANSMEMBRANE (Tran...)
   417 - 438

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
8. mobidb-lite (disord...)
   217 - 423

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   135 - 172

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_02666_1
MKYSYILSAVAGAVLSQEVAAEELPKKVPTPQVGTPVYTFATDKEHLCVPAPSVPAVCSEACLSVASRLSSSKNCFLPDK
VVSEVVQCLACKKAFPSDVAKPAAAVQEFLDKCKVPEIPIKFCAEKPAKRAPLRIATVKRASPEKASAPLKRSPAAPKKI
TKRTASPLEKVANGLNGSLKKLRDVRYSLAGRQTGGGSGSADGSDGAEVDATAVDDTEAGSTGATDGSDGSEVVADGSDG
TETGATDGSDGTEVGATDGSDGTGSGATDGSDGTGSGATDGSDGTETGATDGSDGTEVGATDGTDGTETGATDGTETGAI
DGTETDATGGSGSGDSVSVDAGELPDGTPSGPDGSEETASDGSLLEDGSGASPSDDGTVPSPIPSSSSPGSDDETGPIAG
PGGNTTMPGPIEQSNSAMSLSMSSQSALVGAVLLIALYL

GO term prediction