Protein
MCA_02642_2
Length
541 amino acids
Gene name: RET2
Description: Coatomer (COPI) subunit delta
Browser: contigB:1928958-1930671-
RNA-seq: read pairs 5540, FPKM 126.3, percentile rank 82.5% (100% = highest expression)
Protein function
| Annotation: | RET2 | Coatomer (COPI) subunit delta | |
|---|---|---|---|
| KEGG: | K20471 | COPD | coatomer subunit delta |
| EGGNOG: | 0PFIY | PGUG_00981 | Coatomer subunit delta |
| SGD closest match: | S000001947 | RET2 | Coatomer subunit delta |
| CGD closest match: | CAL0000177123 | RET2 | Coatomer subunit delta |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02867_1 | 60.26% | 531 | 0.0 | MIA_02867_1 |
| A0A0J9XI71_GEOCN | 55.06% | 543 | 0.0 | Coatomer subunit delta OS=Geotrichum candidum GN=BN980_GECA18s00758g PE=3 SV=1 |
| UniRef50_A0A0J9XI71 | 55.06% | 543 | 1e-178 | Coatomer subunit delta n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XI71_GEOCN |
| Q6C3S2_YARLI | 47.39% | 555 | 2e-142 | Coatomer subunit delta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E32542g PE=3 SV=1 |
| A0A167D7S2_9ASCO | 40.53% | 417 | 4e-85 | Coatomer subunit delta OS=Sugiyamaella lignohabitans GN=RET2 PE=3 SV=1 |
| A0A1E3PKZ4_9ASCO | 81.18% | 170 | 6e-71 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82884 PE=3 SV=1 |
| A0A060SZW8_BLAAD | 76.84% | 177 | 2e-70 | Coatomer subunit delta OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C07590g PE=3 SV=1 |
| A0A1D8PND9_CANAL | 71.26% | 174 | 1e-61 | Coatomer subunit delta OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RET2 PE=3 SV=1 |
| A0A1E4TIY9_9ASCO | 57.47% | 174 | 3e-48 | Coatomer subunit delta OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_287 PE=3 SV=1 |
| COPD_YEAST | 61.05% | 172 | 4e-45 | Coatomer subunit delta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RET2 PE=1 SV=3 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9610
Predicted cleavage: 32
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
450
500
541
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
cd09254 (AP_delta-C...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_02642_2 MVVLAASICTRGGKTILSRQFRDLPKDRVAALLASFPKLISTGTQHTTVEDDNVRYVYQPLEELYIVLITNLQSNILQDI DTLHLLAQIVSSTVPVVDEREVLNCCFEILSAFDEVISLGYRENLNLSQVQTFLEMESHEERIHEIIERNKEIEAAEERK LRAKQLEIARSRGAGPGRNIPNFPAPTGFGRNNSGAGQSSYGGGSGSIGGGSSKSSSSNATIVVGDTYEKPKNTRSTPAR GKGLQLGSKKANAIGSLRDISDAETARLMESMELSANKPKPKQQQQSAPSEPANEGILVSIKEEVTAQIQRMGSIESSEL KGSLQLKIGNPELTDIQLIVSADGAPSQYRTHPNVDKQAFQQQKVIKVRDPNRPFPGNNHQLGVLRWQASAKADDDTFVP LLFHCWFSEAGDDSITTILEYEVRPGFEEIIENFKVQIPLLSGNVSVSSSDQTWNQYDDEIEWLIPEIVPNSATTSSGSL EWTAEANSENDFFPMTVSFSLKNPLKTFGKVDVVDVATLADSNESVEFKKEVIVSATNSIV
GO term prediction
Biological Process
GO:0006810 transport
Molecular Function
None predicted.
Cellular Component
None predicted.