Protein
MCA_02622_1
Length
1,093 amino acids
Gene name: RIM21
Description: pH-response regulator protein palH/RIM21
Browser: contigB:1852019-1855301-
RNA-seq: read pairs 1114, FPKM 12.6, percentile rank 30.1% (100% = highest expression)
Protein function
| Annotation: | RIM21 | pH-response regulator protein palH/RIM21 | |
|---|---|---|---|
| EGGNOG: | 0PFGZ | RIM21 | pH-response regulator protein palH RIM21 |
| SGD closest match: | S000005238 | RIM21 | pH-response regulator protein palH/RIM21 |
| CGD closest match: | CAL0000199829 | RIM21 | pH-response regulator protein palH/RIM21 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04966_1 | 55.17% | 435 | 3e-145 | MIA_04966_1 |
| A0A0J9X308_GEOCN | 55.56% | 396 | 1e-125 | Similar to Saccharomyces cerevisiae YNL294C RIM21 pH sensor molecule, component of the RIM101 pathway, has a role in cell wall construction and alkaline pH response OS=Geotrichum candidum GN=BN980_GECA01s07644g PE=4 SV=1 |
| UniRef50_A0A0J9X308 | 55.56% | 396 | 3e-122 | Similar to Saccharomyces cerevisiae YNL294C RIM21 pH sensor molecule, component of the RIM101 pathway, has a role in cell wall construction and alkaline pH response n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X308_GEOCN |
| PALH_YARLI | 40.47% | 383 | 5e-74 | pH-response regulator protein palH/RIM21 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM21 PE=3 SV=2 |
| A0A1E3PS61_9ASCO | 43.53% | 340 | 6e-68 | PalH-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48773 PE=4 SV=1 |
| A0A060T0X9_BLAAD | 37.50% | 376 | 1e-59 | ARAD1C16214p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C16214g PE=4 SV=1 |
| A0A1E4TGR4_9ASCO | 37.18% | 347 | 1e-55 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2663 PE=4 SV=1 |
| A0A167EN16_9ASCO | 30.05% | 406 | 3e-39 | Rim21p OS=Sugiyamaella lignohabitans GN=RIM21 PE=4 SV=1 |
| PALH_CANAL | 22.09% | 326 | 7e-20 | pH-response regulator protein palH/RIM21 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RIM21 PE=3 SV=1 |
| PALH_YEAST | 22.27% | 211 | 8e-12 | pH-response regulator protein palH/RIM21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIM21 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0967
Protein family membership
- PalH/RIM21 (IPR014844)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF08733 (PalH)
-
no IPR
Unintegrated signatures
-
CYTOPLASMIC_D... (C...)
-
NON_CYTOPLASM... (N...)
-
-
TRANSMEMBRANE (Tran...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_02622_1 MANLWKDAIPPSRVSNDITSPTSTATCPEYFVPAGTLTFYDSNSKSMKTVDITASGLYYPNCEARTNPKISNYESLIGSS YLGYHDPFHGSVIPIAYSLSATTVVAWLLFILLLISQKRRPLFQKFATLFVAVSLTVFLAQATQVLESQYYKGYHDSEEL RQKIFGGLAFRILEVLMTLIVWLAHLQVLLRLFDRQKERQIIKVIGIVLAVIDTTLWCLVNFFVPYHSDNKYIRDIIPVL AYLFQISLSVMYLGLVALYSFRKRQFAYSFRMQSKSKYNKYKSGFSPSYTNTDNGIYSNNITNSYSSSNNSSRQNSLLVA IISLVSVSLPLIFFIIDISQYWLTGWSEFIRWVSDVSASVVVWEWVDVIEKQERQQQKNGVLGRPIFDEEDQDFDKMRFA LEGKRYERNKRGRKRKAFKRSHPNNNNDDSDSDHSDAGNGGSGGTGAGSADVTGITYPSPVLSTSTQNQRSTNSAGDHPS NSIASQGSSSLGMPPNSIQNNTSSTLPRSQEPFTYTTNNQTPLSHHHQHTSRRPHHYGAGGGLSNASSSLPGKYWPFTLF FKHSRDWVISRPTSSAASSSTSYGPQICLNELNNNTNSSAPNNPSTFPITSLHQASSQSSTENSRNPEVIRLRNGTVIHT HGLASSSRTVRNSSTNGPTGDNTGMTPGNSNTSASTTTPQSNLHYSNTNTTPQIVASAPPTSSNNNLEPSAPPLPYSTQM NIIENSSSPTNNNNNNNAGTHYNHHLQLFNHHNNNGHSSAGPSRSTSRASRAPSSTHSIQSNNTGTHSSMSVPRRHTIDN NDSRSNPNSPITQEFNPNELQQQHNASSIVSSCTVSRTGSTRSVRAQNAHSSNSPIMQNPRVVANNDTTNLRQVTIETNE ETQRTNADSSVNDNANSEEEKSKAQPKMIKYVHPLRRNSKPSSASSTSTSRNSNGNFHPSTSSSASEDHNAASFSESASQ PSGSTQLPNIREGQLISSAGFQRSHNTNNSNSHRSTTTRTNSHMATIDQSLSTSNNSGPNTSTYMSNNAAAGTEEDDDEE MYRPIGHNHSLHPPPFQSSSSTNNDESLPNFSSIIPGFSPGDYWDDKLPPPPP
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.