Protein

MCA_02588_1

Length
279 amino acids


Browser: contigB:1750658-1751498+

RNA-seq: read pairs 81, FPKM 3.6, percentile rank 14.9% (100% = highest expression)

Protein function

EGGNOG:0PGPZto reverse transcriptase
CGD closest match:CAL0000175689POL93Pol93p

Protein alignments

%idAln lengthE-value
A0A060T683_BLAAD32.43%2591e-33ARAD1B13926p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B13926g PE=4 SV=1
UniRef50_A0A060T68332.43%2593e-30ARAD1B13926p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T683_BLAAD
B5FVH8_YARLI27.69%2421e-20YALI0E14388p2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E14388g2 PE=4 SV=1
A0A0J9XCS2_GEOCN33.85%1302e-10Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA10s00604g PE=4 SV=1
A0A1D8PC70_CANAL37.50%808e-06Pol93p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=POL93 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1010

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 279

Detailed signature matches

Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF56672 (DNA/RNA p...)
  2. cd00303 (retropepsi...)

Residue annotation

  1. Catalytic residue ...
  2. catalytic motif cd...
  3. inhibitor binding ...
  4. Active site flap c...

Protein sequence

>MCA_02588_1
MEISKIDINAVTPDDGPEIGKKIVVPTCIKLQSRDWKPRFNALIDSGAASYFVSHEAIQRNHLEHLTVPCPPIKLSSAFS
NSQTCKRKVQLTFHIGPIEATKSFFVVHGLSHDMILGTPFTAEFADFVDLKSFSVAGVGSVADDPLFVSAIEFERLAKSK
ENAIGICVLKFDEPVKEPASLEVLPFDASEYKDVLTNDPPTGLPPERDVTHPIDVVPGSTPPYRSYYRLSKAESDYLTEE
LSKMANTGMIRPSSSPYSAPVLFVKRRMDLSAFVWITAC

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.