Protein
MCA_02557_1
Length
1,343 amino acids
Gene name: PDS5
Description: Sister chromatid cohesion protein PDS5
Browser: contigB:1642569-1646743-
RNA-seq: read pairs 1368, FPKM 12.6, percentile rank 30.1% (100% = highest expression)
Protein function
| Annotation: | PDS5 | Sister chromatid cohesion protein PDS5 | |
|---|---|---|---|
| KEGG: | K11267 | PDS5 | sister chromatid cohesion protein PDS5 |
| EGGNOG: | 0PFZ5 | FG06953.1 | sister chromatid cohesion |
| SGD closest match: | S000004681 | PDS5 | Sister chromatid cohesion protein PDS5 |
| CGD closest match: | CAL0000178884 | PDS5 | Pds5p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05326_1 | 46.56% | 1179 | 0.0 | MIA_05326_1 |
| A0A0J9XHS9_GEOCN | 44.56% | 1122 | 0.0 | Similar to Saccharomyces cerevisiae YMR076C PDS5 Protein required for establishment and maintenance of sister chromatid condensation and cohesion OS=Geotrichum candidum GN=BN980_GECA19s00296g PE=4 SV=1 |
| UniRef50_A0A0J9XHS9 | 44.56% | 1122 | 0.0 | Similar to Saccharomyces cerevisiae YMR076C PDS5 Protein required for establishment and maintenance of sister chromatid condensation and cohesion n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XHS9_GEOCN |
| A0A060T6D2_BLAAD | 33.36% | 1142 | 0.0 | ARAD1C18656p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C18656g PE=4 SV=1 |
| A0A1E3PIW0_9ASCO | 34.30% | 1073 | 1e-172 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_43083 PE=4 SV=1 |
| A0A167C194_9ASCO | 31.54% | 1113 | 1e-142 | Pds5p OS=Sugiyamaella lignohabitans GN=PDS5 PE=4 SV=1 |
| A0A1D8PHZ6_CANAL | 28.92% | 1172 | 1e-138 | Pds5p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PDS5 PE=4 SV=1 |
| PDS5_YEAST | 28.91% | 1138 | 2e-129 | Sister chromatid cohesion protein PDS5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDS5 PE=1 SV=1 |
| Q6C631_YARLI | 25.39% | 1142 | 9e-86 | YALI0E12969p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E12969g PE=4 SV=2 |
| A0A1E4TG77_9ASCO | 22.93% | 484 | 1e-15 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_109263 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0457
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
200
400
600
800
1000
1200
1343
Detailed signature matches
-
-
SSF48371 (ARM repeat)
-
no IPR
Unintegrated signatures
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CYTOPLASMIC_D... (C...)
-
-
NON_CYTOPLASM... (N...)
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TRANSMEMBRANE (Tran...)
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mobidb-lite (disord...)
Protein sequence
>MCA_02557_1 MTQNAEASSKFTFNHTINPPPRDTKKLTEYLKELEKALNNARQESTDVELLKPISRDLVSSKLLGHKDEGVRAHVGHCLI DILELFAPNAPYSSSELQKIFSLFIDLISQLETPNDTYYREHFYVMEKIFQTQSIALVADLPSAESLTKKIFHSFYSMVD KSLKSNFQVEYHLGLILSQLTFELETLPAQTVDIILSHFLTKAPASLLKDNQSLNVESPGYMLSKTICQDNIDIMTRHVN QYFADILSGSFFDDEEGGEKEEKPDLLANQKKLLNLAEQLWQAVPELVTSIMGQLEQGLLVEDDEFRTITLVTFSRIIAS PTSRVDFIKEHYSTWKSWLGRSIDKSPNVRAAWTNCLPSIIINRTDVMSEVVKSLSDRLNDPDEKVRIAACSTVGQLPVD IVIKKLNFQPLFDNLFARLRDKKSSVREAAFKVVGKLFADGYDLIDKEDETAITLFRPIPQKIFDQVYLNDSEVNELIDI CLNIYIFPPNPDDDKRAKRILNIITNLDEQGRTAFNALLKRQSTLSKYLTVLVALMKDYSTSKDPSTVEQKIRKTISWFS APFADPAKTEICLTELFEKRDDKTLKYIGAAVNPESTFHTVHKAVKELLAKYKDYKLDGMHHTIRILLYRTSFLIINRNT IKPIIELSKDRGDKMSLVIHEFLKSISAIHPALMKAHVQDLIMIIEKAEVGTRGNAETLKAATLLAEKFSEMLPQTPKFF GALIKFATEGSPEEATEAVKLIAYSKDKELYFSSLMKTVSKLDIDNPFLSTYLSSIAELITLCPDITEPEYAEIQKYVIE KILRTNKKKASDDDPDWVEDKNLDTEAQSKIISLHILVNRFIKTAGDSTNNHLLASPVFTLLSLLIKSGEVSKDHSTPSY LRSRLQLEAGILMLDCATVKEIQKLIKPTDIIKLAFLIRKNELAVRKGFIHKLMKYWSDGKIPNRFLPLVFMMAHEPDSE LFHYVSTWIRARSVYNQNRSRTEKSTDILSLELAFPALIHLIAHYHELVNTTTKESITSEDPEKEKSEQLEFAKFAADYI LFYLRTAASVTNLSLILYMAQRIKQFRDGVKDELSDKLYFLSEEAVIVINKFKQFKGWSVDAWPGTMGVPADIYKAMPWD PTGREVSKTIYLKDEVLIPLEEYLKKKIWKRKRNADEFGFEQEDDQDDGSNKKTAASSKPRSKPSRNNSRKQRKVATNDE DAKLTKKKPAKKSYGRSKRKSSKGEDDDAAEGDAEPAEETGPRRKSARLAGTGSSSGNRSFKETSSEEEDSFYEDEDDEE EEEEGEEEQQPQEDDKHKQNGKKDTAANTSSSRKLIDDSDDDGSLSELSYDSDLDNAADTFLD
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005488 binding
Cellular Component
None predicted.