Protein
MCA_02556_1
Length
936 amino acids
Browser: contigB:1639086-1641987+
RNA-seq: read pairs 416, FPKM 5.5, percentile rank 18.4% (100% = highest expression)
Protein function
| EGGNOG: | 0PM4K | PGUG_00253 | PHD finger domain protein |
|---|---|---|---|
| SGD closest match: | S000004680 | RCO1 | Transcriptional regulatory protein RCO1 |
| CGD closest match: | CAL0000176784 | orf19.6506 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01915_1 | 60.08% | 516 | 0.0 | MIA_01915_1 |
| A0A0J9XI84_GEOCN | 54.44% | 360 | 7e-130 | Similar to Saccharomyces cerevisiae YMR075W RCO1 Essential subunit of the histone deacetylase Rpd3S complex OS=Geotrichum candidum GN=BN980_GECA19s00307g PE=4 SV=1 |
| UniRef50_A0A0J9XI84 | 54.44% | 360 | 1e-126 | Similar to Saccharomyces cerevisiae YMR075W RCO1 Essential subunit of the histone deacetylase Rpd3S complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XI84_GEOCN |
| A0A060T0V7_BLAAD | 46.72% | 351 | 2e-98 | ARAD1C18634p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C18634g PE=4 SV=1 |
| A0A1E3PKG8_9ASCO | 37.45% | 518 | 1e-85 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51204 PE=4 SV=1 |
| Q6C630_YARLI | 44.62% | 325 | 2e-87 | YALI0E12991p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E12991g PE=4 SV=2 |
| A0A1E4TG33_9ASCO | 40.31% | 325 | 2e-74 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_109262 PE=4 SV=1 |
| A0A167C199_9ASCO | 38.25% | 366 | 2e-67 | Rco1p OS=Sugiyamaella lignohabitans GN=RCO1 PE=4 SV=1 |
| A0A1D8PR21_CANAL | 30.50% | 400 | 4e-48 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6506 PE=4 SV=1 |
| RCO1_YEAST | 29.57% | 328 | 3e-40 | Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RCO1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1502
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
936
Detailed signature matches
no IPR
Unintegrated signatures
-
cd15534 (PHD2_PHF12...)
-
cd15535 (PHD1_Rco1)
-
mobidb-lite (disord...)
Residue annotation
-
putative histone H...
-
Zn binding site cd...
-
putative histone H...
-
Zn binding site cd...
Protein sequence
>MCA_02556_1 MSRMDNIRPTLVLSAEKRRKILEHSKTFISADHEPLVWEEPDPAPSLPVATGYPLDVPPPQKLLPKMRKKPPSTPMALEQ YALRPEIVEGQLSSRPLRSLLRGSTSVITLQPKEAFEQPEDFLHTPEASSKIQSLRDPNKKLTVLNNQWQNNTPNRSHVV KAKKAKDPSKEKNNSNSNSNSQKEPGYIPIAPKTIHSGIPFSSVIVDDGMPSLFMGSSPSISASPSPSISSSPTFHNGEL YDNQQTMDESMFHDESTNGGNLDSYPNDTTTSSYSEDTTAGGTSDGKKIKIEDDKTDNSKRQLIIKLKPPYNEQQPLDSN PTSTPSPNENQKKQLIVKLKTPVIDPSNLSDESKENLVKRLLDHTLKTPMTEALTSSSNIRLGISKKLQNNQVENISSSL PISEKKFNTTQKNIDSFFAPTSSTLQESSLDLKRPLEESPSSLKGKRPSKKKKNSDVREATPPSMNTRSQQIDEAAANDD FCSVCKGVGRFLCCEACPKSFHFSCLNPPLDEKSLPEGEWLCVECNAKRNPPKPYKRGLFSQLLLQLDKHNPIQFSLPKK IQQRFEGVSSNEYGEYIDCDMKLFKSNRSGFLENQDPYKLTDKHGNPIFCYKCKKSSVSGGPIARCEYCSLSWHLDCLNP PLPTVKTIGTKWKCPNHADHVFEKKRQPKTAKVIDTNLRRGFKNDGNIEILNSSDEEQLETEYRDIPFNSYYATETGVTA PVPNNLIKPLVQSGVIYRIPEHGVKLDFIQTVREMNSEAYQDTKNADILFALDQLATKDQKFREGVRDLCYITAEQRDIA TAEARRNLEVLIDAALNEPPPRTSSPIAVPSPMIKKESVTTRHHSRKASLVASSKIQAVAEEGRLKRSSRRSSAYRGSSN DQENLHSSIGTNKQTNNDEYSEDYISPEEKTHLLAIQKLLKLKGKDALMDFLLPRA
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.