Protein

MCA_02552_1

Length
592 amino acids

Gene name: ARB1

Description: ATPase of the ATP-binding cassette (ABC) family; involved in 40S and 60S ribosome biogenesis

Browser: contigB:1631213-1632992-

RNA-seq: read pairs 10188, FPKM 212.3, percentile rank 88.8% (100% = highest expression)

Protein function

Annotation:ARB1ATPase of the ATP-binding cassette (ABC) family; involved in 40S and 60S ribosome biogenesis
KEGG:K06185ABCF2 ATP-binding cassette, subfamily F, member 2
EGGNOG:0PH57FG02025.1ATP-binding cassette, subfamily F, member 2
SGD closest match:S000000838ARB1ABC transporter ATP-binding protein ARB1
CGD closest match:CAL0000185948KRE30ATP-binding cassette family ATPase

Protein alignments

%idAln lengthE-value
MIA_01911_191.07%5600.0MIA_01911_1
A0A0J9XFL8_GEOCN88.48%5640.0Similar to Saccharomyces cerevisiae YER036C ARB1 ATPase of the ATP-binding cassette (ABC) family involved in 40S and 60S ribosome biogenesis OS=Geotrichum candidum GN=BN980_GECA13s02661g PE=4 SV=1
A0A060TD39_BLAAD87.50%5600.0ARAD1D44792p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D44792g PE=4 SV=1
Q6C848_YARLI85.16%5660.0YALI0D22803p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D22803g PE=4 SV=1
A0A167DLF7_9ASCO85.00%5600.0ATP-binding cassette family ATPase ARB1 OS=Sugiyamaella lignohabitans GN=ARB1 PE=4 SV=1
A0A1E3PSC1_9ASCO83.63%5620.0Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_44807 PE=4 SV=1
A0A1E4T9B6_9ASCO84.29%5600.0Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_4465 PE=4 SV=1
Q5A2T2_CANAL81.61%5600.0ATP-binding cassette family ATPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=KRE30 PE=4 SV=1
ARB1_YEAST80.18%5650.0ABC transporter ATP-binding protein ARB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARB1 PE=1 SV=1
UniRef50_P4002480.18%5650.0ABC transporter ATP-binding protein ARB1 n=690 Tax=cellular organisms TaxID=131567 RepID=ARB1_YEAST

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2666

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Domain
1 100 200 300 400 500 592

Detailed signature matches

  1. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  2. Domain IPR003439
    ABC transporter-like
    1. PF00005 (ABC_tran)
    2. PS50893 (ABC_TRANSP...)
  3. Domain IPR003593
    AAA+ ATPase domain
    1. SM00382 (AAA_5)
  4. Domain IPR032781
    ABC-transporter extension domain
    1. PF12848 (ABC_tran_Xtn)
  5. SITE IPR017871
    ABC transporter, conserved site
    1. PS00211 (ABC_TRANSP...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:3.40.50...
  3. cd03221 (ABCF_EF-3)
  4. mobidb-lite (disord...)

Protein sequence

>MCA_02552_1
MAVSASKAKREAKRAEKGKKSKSSKEVEDTAAKVAALKLQKDKHGLSDRVTTGVLASIPTSRDVKIESVSLVFHGKVLIQ
DTTLELNYGRRYGLLGANGCGKSTLLKAIAAREYPIPDQIDIYLLNEPAEATEFSALEYVVREAEHELKRLEALSEKILE
EEGPDSPALQDLYERIDEMDPNTFESRASVILIGLGFNSKTIKKMTKDMSGGWRMRVALAKALFVKPTLLLLDDPTAHLD
LEACVWLEEYLKRWDRTLVLVSHSQDFLNGVCTNMVDMRQKKLLLYGGNYDSYVKTRAEQETNQMKQYNKQQEEIAHIKK
FIASAGTYANLVRQAKSRQKILDKMEADGLIEKVVPERVFSFRFPSVEKLPPPVLSFDDVTFSYSGKAEDNLYEHLNFGV
DMDSRIALVGPNGVGKSTLLKLMTGQLTPTDGRVSRHTHLKIGVYSQHSADQLDLTKNALEFVRDKFPHISQDFQYWRQQ
LGRYGLTGEGQTATMATLSEGQLSRVVFALLAIEGPNMILLDEPTNGLDIPTIDSLADAINEFEGGTVVVSHDFRLLDKI
AKDIFVCENKSVTRWDDSILKYKEKLAKNIVL

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005524 ATP binding
GO:0016887 ATPase activity

Cellular Component

None predicted.