Protein
MCA_02525_1
Length
528 amino acids
Browser: contigB:1560004-1561591+
RNA-seq: read pairs 1168, FPKM 27.3, percentile rank 50.0% (100% = highest expression)
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XAQ7_GEOCN | 33.11% | 148 | 6e-15 | Similar to Saccharomyces cerevisiae YLR018C POM34 Subunit of the transmembrane ring of the nuclear pore complex (NPC) OS=Geotrichum candidum GN=BN980_GECA06s01726g PE=4 SV=1 |
| UniRef50_A0A0J9XAQ7 | 33.11% | 148 | 1e-11 | Similar to Saccharomyces cerevisiae YLR018C POM34 Subunit of the transmembrane ring of the nuclear pore complex (NPC) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XAQ7_GEOCN |
| A0A060T1Z7_BLAAD | 27.03% | 148 | 4e-14 | ARAD1C28028p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C28028g PE=4 SV=1 |
| A0A167FNM5_9ASCO | 30.99% | 142 | 2e-13 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_3144 PE=4 SV=1 |
| MIA_03298_1 | 55.00% | 60 | 3e-11 | MIA_03298_1 |
| A0A1E4TBC0_9ASCO | 28.08% | 146 | 1e-08 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_148401 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0827
Predicted cleavage: 22
Protein family membership
- Nuclear pore complex component (IPR012578)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
CYTOPLASMIC_D... (C...)
-
NON_CYTOPLASM... (N...)
-
TRANSMEMBRANE (Tran...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_02525_1 MTLDSPSFLQSRYSMGTPKRQMGSSTDSNTTLDYGSQTFQTPPPQVSSASFVNDLNNTTSNSINSPQNSNYSMNQGNSSF LSQSNGTPNSSVLYKTPQAQVLRSNPFDLSVNSASSGPAPSPKAFSPNALNQSLTKKSLTTLQNPGNGIFSSPKFPGKGT ITSELNQEKEPSTTPKVEPKKEVQVPTGEWESPTLKEIRSRVVNTELATTTLLVNSGLLCVLRALIYFLEKNELTVRISS TFQSYNLLSEERINMVFLLGSYITQGIQLLLIFNICVNGYRIFVHRNRLEGIKLTQKQSQLLNITNSPKVSIVPKPIYSP PKYMKSTPESRISSPSRSSILTSPNITGLSSSPMSSPAVKTKFNTGSPLKNNIYSAVSTPTASPLKASLTDSPGSTTLTN LFATPTKPSAPSSPLAGLSQKLNSPSTESPNRGSSLVSNGNPNSLPGSPLDVNKSLSIGNISSTPTLKHQKSTDLRRRSL HAAATAVTASPGNSTADTSFNSSSLNLSGRYKYLANTPSHRHRIVRDI
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.