Protein
MCA_02500_1
Length
1,039 amino acids
Browser: contigB:1485087-1488332+
RNA-seq: read pairs 3710, FPKM 44.1, percentile rank 62.5% (100% = highest expression)
Protein function
| EGGNOG: | 0PGY9 | FG01629.1 | R3H domain protein |
|---|---|---|---|
| SGD closest match: | S000000147 | PIN4 | RNA-binding protein PIN4 |
| CGD closest match: | CAL0000186409 | PIN4 | Pin4p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02820_1 | 92.31% | 117 | 3e-53 | MIA_02820_1 |
| A0A0J9X5A8_GEOCN | 92.86% | 112 | 4e-53 | Similar to Saccharomyces cerevisiae YBL051C PIN4 Protein involved in G2/M phase progression and response to DNA damage OS=Geotrichum candidum GN=BN980_GECA02s03453g PE=4 SV=1 |
| UniRef50_A0A0J9X5A8 | 92.86% | 112 | 8e-50 | Similar to Saccharomyces cerevisiae YBL051C PIN4 Protein involved in G2/M phase progression and response to DNA damage n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X5A8_GEOCN |
| A0A060SX74_BLAAD | 91.96% | 112 | 2e-52 | ARAD1A02266p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A02266g PE=4 SV=1 |
| A0A1E3PHK6_9ASCO | 90.09% | 111 | 3e-50 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47298 PE=4 SV=1 |
| Q6C8Y8_YARLI | 88.99% | 109 | 1e-50 | YALI0D15752p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D15752g PE=4 SV=1 |
| A0A1E4TAL8_9ASCO | 86.73% | 113 | 6e-49 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_128796 PE=4 SV=1 |
| A0A167CTL0_9ASCO | 84.35% | 115 | 1e-47 | Pin4p OS=Sugiyamaella lignohabitans GN=PIN4 PE=4 SV=1 |
| A0A1D8PRZ6_CANAL | 87.27% | 110 | 5e-47 | Pin4p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PIN4 PE=4 SV=1 |
| PIN4_YEAST | 80.36% | 112 | 9e-46 | RNA-binding protein PIN4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PIN4 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0098
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
900
1039
Detailed signature matches
-
-
cd12253 (RRM_PIN4_like)
-
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_02500_1 MSMSIQEPDISSPPSNLSTPNLSTSSFASPSLSNSNLSHQPQQRSFIRRSQSRHFDTFSSSPSTSPSIQSSSVHTALEQQ PSYLNLYPDAHPTNNIVYSSAPMDDKPRHFNTTPTDKQKNNSMTSSPWNNINPNDIQQQQQQQQPASSSSSSSSSSSASY WMDSNQFSRGLKSQPSQTFLTNNNNANLNSNPSATIATGGSQPPIVNLSQPPNVIPGNFQLGMMPTTSQRKLASANQQQS IQLTPPGSSSSAVSTSSSGSSTNASSMGSVGALPPNPNMPGGMIGGPPSSLDEDLIPTAIVIKNIPFAIKKEQLLEVMTN LRLPIPYAFNYHFDNGVFRGLAFANFTTPEDTSAVINNLNGREIGGRKLRVEYKKMLPLAERERIEREKREKRGQLEEQH RGPNAPTNNKNIRHQHNHHHHNHNNHQQHHNNANNHSNANLPSAQQLVSLQPNQQQQLVQSANQQQQQQATASVTANSPG PTNSSAAAQQGHANNLFSQQGGPQSSRAFIGNALNSTHSSPGASHNASATTPNSRNANTATVVPHSPSSSSIAGNNMSVD LNDPDNLGFYSKILLFRDDRSRNQLVFPASLTPQQKNNIMILCKTLGVVYNVQDNGALAVTRLSNNNGGSTTNSVNTNTN GSNTMANYSQTPMRQQQHMASTLNQQPQQPPLQGMFDGPHPLQGSNHLNSMSATNLSSFVNQPSSIGLQHPQPQSPLNNM HTQPHNGLLFSQQGGSGSNQYSHAPPAGPPHNILRGTKSFADIRAPVNNFGSMVSSPGTPAGSPFFPSQTPPPQLSLQNQ SNQQSQPQPNLSALHQQRGGYGHYNQPFVQQQQQQPQQNQQMMGHQPYMSSSHGLPYNLGNNNNFSNDYQISGFQQFGGG AFGGSTTSLTNPSGIGSLTDSFSNMLSIGGTSLSRAPSTSNITGSLTGPGSVGSSSPTASISSMQNIDGSAGNNNSNAVT TTTTTMTTNSRLSNSAPPTSGGSNTNSYNNNSSNTHSDDNKDDDFSSNNGSSSVGNAGVIGSKPTDVTNDSNEATQKND
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.