Protein

MCA_02470_1

Length
750 amino acids


Browser: contigB:1398051-1400401+

RNA-seq: read pairs 4061, FPKM 66.8, percentile rank 71.5% (100% = highest expression)

Protein function

KEGG:K14018PLAA phospholipase A-2-activating protein
EGGNOG:0PHA6PGUG_01765Polyubiquitin binding protein
SGD closest match:S000001696DOA1Protein DOA1
CGD closest match:CAL0000180586DOA1Doa1p

Protein alignments

%idAln lengthE-value
MIA_01473_157.38%7790.0MIA_01473_1
A0A0J9X5N3_GEOCN49.54%7690.0Similar to Saccharomyces cerevisiae YKL213C DOA1 WD repeat protein required for ubiquitin-mediated protein degradation OS=Geotrichum candidum GN=BN980_GECA03s03057g PE=4 SV=1
UniRef50_A0A0J9X5N349.54%7690.0Similar to Saccharomyces cerevisiae YKL213C DOA1 WD repeat protein required for ubiquitin-mediated protein degradation n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X5N3_GEOCN
A0A167FWY3_9ASCO39.57%7482e-160Doa1p OS=Sugiyamaella lignohabitans GN=DOA1 PE=4 SV=1
A0A1E3PGH5_9ASCO37.29%7911e-150PFU-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52143 PE=4 SV=1
A0A060TBN2_BLAAD37.59%7292e-148ARAD1D33330p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D33330g PE=4 SV=1
Q6C9H6_YARLI37.52%7339e-142YALI0D11132p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D11132g PE=4 SV=1
A0A1E4TIV7_9ASCO34.30%7584e-127Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_74329 PE=4 SV=1
A0A1D8PEM3_CANAL32.33%7983e-119Doa1p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DOA1 PE=4 SV=1
DOA1_YEAST34.21%7226e-116Protein DOA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DOA1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0627

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Repeat
  4. Repeat
1 100 200 300 400 500 600 700 750

Detailed signature matches

    1. SSF50978 (WD40 repe...)
    2. PS50294 (WD_REPEATS...)
    1. PS51394 (PFU)
    2. PF09070 (PFU)
    1. PF08324 (PUL)
    2. PS51396 (PUL)
    1. PF00400 (WD40)
    2. PS50082 (WD_REPEATS_2)
    3. SM00320 (WD40_4)
    1. PR00320 (GPROTEINBRPT)
Unintegrated signatures no IPR
Unintegrated signatures
  1. cd00200 (WD40)
  2. mobidb-lite (disord...)

Residue annotation

  1. structural tetrad ...

Protein sequence

>MCA_02470_1
MSQSIPRYDLSSNLIGHQADVKAVTFLTLTQLPLFRETAHGEPTSWLFKQLYHGQAYVNSVAWFDDSETPLVYAGDQQSN
IYAFLPIDPEEDEPMQSTEAVEPFQYLIGHEKNVCALDSNYGLVVSGSWDATAKVWKDGSLLYTLKGHSNAVWAVKILSK
SLVLTGSADKTVALWEDGKLKKVFKGHTDAVRGIAILSDTTFATCSNDASVRIWNVNNTSSTKELYGHTSFIYSIASNPT
TGELVTGGEDRSVRVWRNGDVVQVITLPYVSAWTVSVNPENGDIAVGGNDGSVRIFTRDESRFASEEDRLHFKELVASSG
VGKDQLGSINKESLEGEEGLKVSGTKEGQIKMIRTEFGKVEVYQWSASTWVKIGEAVGSAGTSTKKLYNGIEYDYVFDVD
IEDGAPPLKLPYNVTENPYDAAKRFLQQNELPDSYLDNVANFLIKNTEGIDLASSSAPAQDPYGTRYIPGTSSASASTTD
AGSSYSKSTENLKVLPVKNFVKLVSYQPAPIIRALKTINEKQEASNKISEAELKMIEDSLSSSAGISEQNASSVFTIVTR
VLQAWSPSDILPIMDILRVIIPTLKSFAPVVLIQHLISTLDADLPKVCLLSIRGLVNLFPNGDPRAVKMIETESTKESIF
STVLDYLSKSNPTPARNLAISSLCYNYAVSNWKKGRKNVGGMLNHFVSFFPFMNDSESKYRLLLAIGTLLVDASSTEKKI
AYNIIKNEEDLFLDEDRFKVLVNDLRNLIA

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.