Protein

MCA_02463_1

Length
1,000 amino acids

Browser: contigB:1380165-1383234-

RNA-seq: read pairs 1368, FPKM 16.9, percentile rank 36.8% (100% = highest expression)

Protein function

KEGG:K20407MIOS WD repeat-containing protein mio
EGGNOG:0PGNQPGUG_04385conserved hypothetical protein
SGD closest match:S000000200SEA4SEH-associated protein 4
CGD closest match:CAL0000187891orf19.5897Uncharacterized protein

Protein alignments

%idAln lengthE-value
MIA_05819_145.58%10510.0MIA_05819_1
A0A0J9X9H9_GEOCN43.55%8610.0Similar to Saccharomyces cerevisiae YBL104C SEA4 Subunit of the SEA (Seh1-associated) complex OS=Geotrichum candidum GN=BN980_GECA06s00131g PE=4 SV=1
UniRef50_A0A0J9X9H943.55%8610.0Similar to Saccharomyces cerevisiae YBL104C SEA4 Subunit of the SEA (Seh1-associated) complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9H9_GEOCN
A0A1E3PJC3_9ASCO30.73%11037e-170Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50797 PE=4 SV=1
A0A161HKJ9_9ASCO36.62%7923e-164Sea4p OS=Sugiyamaella lignohabitans GN=SEA4 PE=4 SV=1
Q5ANK4_CANAL33.63%8982e-143Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5897 PE=4 SV=1
Q6C8L0_YARLI34.13%8793e-139YALI0D18788p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D18788g PE=4 SV=1
A0A060SZ29_BLAAD40.49%5364e-118ARAD1C02068p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C02068g PE=4 SV=1
SEA4_YEAST30.55%8973e-115SEH-associated protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEA4 PE=1 SV=2
A0A1E4TLE1_9ASCO31.57%8303e-110Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_89090 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1100

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 600 700 800 900 1000 1000

Detailed signature matches

  1. Domain IPR015943
    WD40/YVTN repeat-like-containing domain
    1. G3DSA:2.130.1...
  2. Domain IPR017986
    WD40-repeat-containing domain
    1. SSF50978 (WD40 repe...)
  3. Domain IPR031488
    WD repeat protein mio, zinc-ribbon like domain
    1. PF17034 (zinc_ribbo...)
  4. Domain IPR013083
    Zinc finger, RING/FYVE/PHD-type
    1. G3DSA:3.30.40.10
Unintegrated signatures no IPR
Unintegrated signatures
  1. cd16691 (mRING-H2-C...)
  2. mobidb-lite (disord...)

Protein sequence

>MCA_02463_1
MFDSILHPYQWSTDDTQYFLTVNSGKNELALRKSIYSNKKYSLSIESRTEFYSKIDSDIRCYSYSPNKPGVVCCGLKGKA
LLFNIQEKAQIPIELQLQGTQKSNPTCNDVSFNSDNLLAIALDKVRAESSLRIFDTKRAEEGAREAISSLAANDLIFSTS
FIPEEPQSIICGSYKSLREFDIRSSSPTFQIFCKDVHDITPDPFNSNFFAAKNQEKRTVSFFDRRFIQADANPLISVSVY
SNQNKENMISCFRASSTRRGEFANLYDDSLIKRWQIEGAGFVNKDESTSRFISSIQTVTDLKNILSFDYVKDLEFPNRIN
IMCAKKNELIRICIKESPSAIRFDPFNNIVSTDTEHLTFITTASNNTSNSNGQNLQSISTNESALQENEDIDDDMASEEY
EATVRPNSSNSRSTIVQNNFYYNVDHILDSDISSTIRKRAISNYSMNCQKNLEILNQYDDFNNSRLASLKDAWKWIERVQ
KSRNSLIQDGVDLSYQGILGIWEGWDSVSQKPQSSKFTGSEVENAITRIIERYRRKIYTNVTTSKVNQRQLCLRSLGWNF
DKDQLEILLKQLKEKGEYEKAAGWAVFHNNIDRAVQILMDSENDQLRMMAAAIAGYDGYSNTTVDNTWKRLCKKMASDLE
NPYMRAIFAYIPDCNWRDVLDQASLPLPELLGIALRFLNDSQLTAYLKSITADVIKNGYIDGIILTGITSRAVDLIQSYV
DKTADVQTAALIISFASPLYFKDERIDHWVECYRNLLNSWRLFSKRSMFDVARSRASLNSDGRISIKPVPRQVSLLCHGC
KKPIHTGGMKPGIEDLSAAANGGSEGSFQKVDQKLSGSILEPSSISPVGNAMAMAMSQRKTTASTSPTAKQSRRGLTNQS
ENPAIFKGFDTNIKCPYCNYPLPRCAVCLMPLGSLSSRTKNDNSLKAMQNYTTINEAVSEVAPEAGAEDKHNQFDRFFVF
CLSCNHGMHSNHARQWFSKHDICAVPDCECTCNQHQPFYN

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.