Protein

MCA_02459_1

Length
281 amino acids

Gene name: TSR3

Description: Ribosome biogenesis protein TSR3

Browser: contigB:1367815-1368967-

RNA-seq: read pairs 835, FPKM 36.6, percentile rank 58.3% (100% = highest expression)

Protein function

Annotation:TSR3Ribosome biogenesis protein TSR3
KEGG:K09140TSR3 pre-rRNA-processing protein TSR3
EGGNOG:0PI8MTSR3Ribosome biogenesis protein required for processing 35S pre-rRNA at site D (By similarity)
SGD closest match:S000005532TSR3Ribosome biogenesis protein TSR3
CGD closest match:CAL0000183119TSR3Ribosome biogenesis protein TSR3

Protein alignments

%idAln lengthE-value
MIA_05816_173.36%2141e-104MIA_05816_1
A0A0J9X8P9_GEOCN65.92%2233e-101Ribosome biogenesis protein TSR3 OS=Geotrichum candidum GN=TSR3 PE=3 SV=1
UniRef50_A0A0J9X8P965.92%2236e-98Ribosome biogenesis protein TSR3 n=3 Tax=Dipodascaceae TaxID=34353 RepID=A0A0J9X8P9_GEOCN
Q6C8J5_YARLI66.51%2099e-100Ribosome biogenesis protein TSR3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TSR3 PE=3 SV=1
A0A060T466_BLAAD63.23%2231e-96Ribosome biogenesis protein TSR3 OS=Blastobotrys adeninivorans GN=TSR3 PE=3 SV=1
TSR3_YEAST66.98%2121e-94Ribosome biogenesis protein TSR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TSR3 PE=1 SV=1
A0A1D8PGR1_CANAL67.69%1953e-90Ribosome biogenesis protein TSR3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TSR3 PE=3 SV=1
A0A1E4T9E9_9ASCO68.65%1852e-90Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_16448 PE=3 SV=1
A0A1E3PFR7_9ASCO70.95%1793e-89Ribosome biogenesis protein TSR3 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=TSR3 PE=3 SV=1
A0A167CYD2_9ASCO68.56%1942e-85Ribosome biogenesis protein TSR3 OS=Sugiyamaella lignohabitans GN=TSR3 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.3303
Predicted cleavage: 13

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 250 281

Detailed signature matches

  1. Family IPR022968
    Ribosome biogenesis protein
    1. MF_01116 (TSR3)
  2. Domain IPR007209
    RNase L inhibitor RLI, possible metal-binding domain
    1. PF04068 (RLI)
  3. Domain IPR007177
    Ribosome biogenesis protein, C-terminal
    1. PF04034 (Ribo_biogen_C)
    2. PD016638
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_02459_1
MGKRPVNRKRRPEVKYKNATPSADFPVKMAMWDFDQCDPKRCSGKKLSRLGLIQELRVGQKSNGIVISPNGKTVVCPDDR
EVVEQYGASVIECSWARLEEVPFSKIGGKHERLLPYFVAANPVNYGKPWKLNCAEAFAACFAIIGHLDWAEQVMSHFSWG
SAFLDINKELIEIYSKCTDSESIQKAQQEWLDELEKEFEKRQQDKEKSAKKMGIVDGQHNIVGVESDSDSASDDKDDESD
DSDDDDDDDDDSDVEQYEINPAFIINGKPPTDNNEDDSDLE

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.