Protein
MCA_02440_1
Length
964 amino acids
Browser: contigB:1315508-1318403+
RNA-seq: read pairs 685, FPKM 8.8, percentile rank 23.8% (100% = highest expression)
Protein function
| KEGG: | K14570 | REX1 | RNA exonuclease 1 [EC:3.1.-.-] |
|---|---|---|---|
| EGGNOG: | 0PGWF | FG01167.1 | exonuclease |
| SGD closest match: | S000003508 | RNH70 | RNA exonuclease 1 |
| CGD closest match: | CAL0000194430 | orf19.6195 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03029_1 | 48.97% | 484 | 6e-140 | MIA_03029_1 |
| A0A060T0Y8_BLAAD | 36.76% | 487 | 3e-89 | ARAD1C19646p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C19646g PE=4 SV=1 |
| UniRef50_A0A060T0Y8 | 36.76% | 487 | 7e-86 | ARAD1C19646p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T0Y8_BLAAD |
| A0A167DTS0_9ASCO | 38.10% | 483 | 2e-86 | Rnh70p OS=Sugiyamaella lignohabitans GN=RNH70 PE=4 SV=1 |
| A0A1E3PMQ0_9ASCO | 36.90% | 496 | 9e-81 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50626 PE=4 SV=1 |
| A0A0J9X2I5_GEOCN | 39.16% | 475 | 1e-78 | Similar to Saccharomyces cerevisiae YGR276C RNH70 3'-5' exoribonuclease OS=Geotrichum candidum GN=BN980_GECA01s02243g PE=4 SV=1 |
| Q6CEI3_YARLI | 32.86% | 490 | 1e-68 | YALI0B15400p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B15400g PE=4 SV=1 |
| A0A1E4TBN1_9ASCO | 33.12% | 465 | 8e-68 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_29263 PE=4 SV=1 |
| Q5AAW5_CANAL | 32.97% | 367 | 6e-47 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6195 PE=4 SV=1 |
| REXO1_YEAST | 32.40% | 358 | 1e-47 | RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNH70 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.7717
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
900
964
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Residue annotation
-
active site cd06145
-
catalytic site cd0...
-
substrate binding ...
Protein sequence
>MCA_02440_1 MKVKKLNKSTVVDSSSPNATIKKHKKSSKSKSLKSSTPDLELDPSDGTVKVVKKGSSPSLHSTYLPDLPSSPLETLAKKS SKPESKKHKKKSSNGSLSSSSKISAAEDDDQDASHLTSAISDKPVDLLSTNGIAEILESSKRRRRSSPSAMSIYPKMKHF HNMESGSSDSSTSSIPLGPSSASKKGRRESINQKPFSELVATTPILQKSKNKLSTPNSHVLEMSPLPISLHTPPPQSSFL SPLQAPSSASSTTSSIASPKVKKKSKKNSAASKSKGTIFNDSSKPHFTVDPSKVTSAIRVPDLRDLILYLTCDGRAPTWV GINQSYAVQRVLTVHVPALSPELFKINVRNQQPQEFTAPKELKAFEKYFSHAWVIEAPGGKYSVSPPSDTFHYITPSPAD KRRKKKMESHSTLQLAPAKKCGPMDMILSVEQLLFNNYPIHPNTPGANITSSHNPAILEAYGHDWVDTVILERSGEGNKK RKEDDSKGPRVFAIDCEMCQSRVGKELTRVTVLDEQGSTLLDELVKPENEIIDYLTIYSGITKEMLENVETKLSDIQKII RDMISAEDIIVGHSLENDLNALKMRHPRIIDTALSFRHPTNPYQKPSLKHLTKEYLRRDIQTGRNGHDSCEDAKACIDLL ELKYKYGLYYGCNHNSDKISIVEKLELSPRISQLQLKNDTDKSTRINPVAVIDYGVPSWAYNKSQSHSFSSYSSSSSSSS SSSTIVSCTNDDEVIESACKHTANHYFTWAKLQELELLNIPTSKITKYLRNKHRESQSSCTRPVGILQSPSSSSQQTSSD VVMEEADDEDTSSNNNNNCSLSRKSSTSTSTTTTSSIFSNSSSSSNSSSNPGVGLSSSSSSSPPPKAQQVSASSPILLAS YQRLNDRLDTLLKAVPPNTAVIVWTGQGDTNRMLELHAKRTRFTYEYNSRNWKEVSCTWDTNDEQELQRAVEIAKRGIAF MTIT
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.