MCA_02423_1

Gene name: NPL6

Description: Chromatin structure-remodeling complex subunit RSC7

Browser: contigB:1245211-1246976-

RNA-seq: read pairs 3816, FPKM 83.9, percentile rank 76.0% (100% = highest expression)

Protein function

Annotation:		NPL6	Chromatin structure-remodeling complex subunit RSC7
KEGG:	K11761	NPL6	chromatin structure-remodeling complex protein RSC7
EGGNOG:	0PFQS	FG01193.1	Chromatin structure-remodeling complex protein RSC7
SGD closest match:	S000004697	NPL6	Chromatin structure-remodeling complex subunit RSC7
CGD closest match:	CAL0000183327	NPL6	Npl6p

Protein alignments

	%id	Aln length	E-value
MIA_05861_1	52.97%	472	3e-146	MIA_05861_1
A0A0J9XA39_GEOCN	54.81%	374	2e-132	Similar to Saccharomyces cerevisiae YMR091C NPL6 Component of the RSC chromatin remodeling complex OS=Geotrichum candidum GN=BN980_GECA05s05070g PE=4 SV=1
UniRef50_A0A0J9XA39	54.81%	374	4e-129	Similar to Saccharomyces cerevisiae YMR091C NPL6 Component of the RSC chromatin remodeling complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XA39_GEOCN
A0A060T5Q5_BLAAD	51.84%	380	4e-124	ARAD1C14388p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C14388g PE=4 SV=1
A0A1E3PEW3_9ASCO	51.83%	355	9e-117	Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_84012 PE=4 SV=1
A0A167D9M1_9ASCO	47.65%	361	8e-99	Npl6p OS=Sugiyamaella lignohabitans GN=NPL6 PE=4 SV=1
A0A1E4TLH4_9ASCO	53.96%	265	2e-95	Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_19205 PE=4 SV=1
Q6CC56_YARLI	51.36%	294	6e-90	YALI0C12342p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C12342g PE=4 SV=1
A0A1D8PG62_CANAL	37.95%	361	1e-64	Npl6p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NPL6 PE=4 SV=1
RSC7_YEAST	34.55%	356	8e-55	Chromatin structure-remodeling complex subunit RSC7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NPL6 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1872
Predicted cleavage: 11

Protein family membership

Domains and repeats

Detailed signature matches

Protein sequence

>MCA_02423_1
MARKRKGRRSKSASQPEDDPEIENEAVASPTSADPSQEHGEEPEQEPEVEPEPEPPVVATPVKGRRGRPPGSKNKVNLHD
PSTLTRSTRRSTPLSSRPSSRKSGTPTPLAETNDTKMNDDDNDDDSADTKRKSEDKQESGEEAKDKSDAENNEESNDLPL
DEPSIPSPSVHTPGRRGRKGNRWGARGKPKTGSAHLSTTHTDPQGNAYIVENDEIVLPSNPKGDAKVDALGHLSGNREYR
VRTFTVQGRGNRLYMLSTEPARCMGFRDSYLLFQKHKRLHKIIATEEEKYDLIKRQIIPHSYKGRAIGIVTARSVFREFG
AKIIVGGRRIIDDYDEEESLQLGYKEGEIADPSDRMPPPGTPYNKNQYVAWHGASSVYHTQSAYAPMNTRESASSYKESY
AKRKKIVVTDENWMYEHANAASVYNHEIYERRKRICTYNSENQSISGLYNGYTGLQFFPAATQPKRAHFVKAKDIVDNET
LEHLGLLKPEDNSSTVVVPENNRKSQFVPHPQIAIETIVELHSPLVPRTGLKDVPEHIFENVPDEIKQAILTQQRIEREA
E

GO term prediction