Protein
MCA_02423_1
Length
561 amino acids
Gene name: NPL6
Description: Chromatin structure-remodeling complex subunit RSC7
Browser: contigB:1245211-1246976-
RNA-seq: read pairs 3816, FPKM 83.9, percentile rank 76.0% (100% = highest expression)
Protein function
Annotation: | NPL6 | Chromatin structure-remodeling complex subunit RSC7 | |
---|---|---|---|
KEGG: | K11761 | NPL6 | chromatin structure-remodeling complex protein RSC7 |
EGGNOG: | 0PFQS | FG01193.1 | Chromatin structure-remodeling complex protein RSC7 |
SGD closest match: | S000004697 | NPL6 | Chromatin structure-remodeling complex subunit RSC7 |
CGD closest match: | CAL0000183327 | NPL6 | Npl6p |
Protein alignments
%id | Aln length | E-value | ||
---|---|---|---|---|
MIA_05861_1 | 52.97% | 472 | 3e-146 | MIA_05861_1 |
A0A0J9XA39_GEOCN | 54.81% | 374 | 2e-132 | Similar to Saccharomyces cerevisiae YMR091C NPL6 Component of the RSC chromatin remodeling complex OS=Geotrichum candidum GN=BN980_GECA05s05070g PE=4 SV=1 |
UniRef50_A0A0J9XA39 | 54.81% | 374 | 4e-129 | Similar to Saccharomyces cerevisiae YMR091C NPL6 Component of the RSC chromatin remodeling complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XA39_GEOCN |
A0A060T5Q5_BLAAD | 51.84% | 380 | 4e-124 | ARAD1C14388p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C14388g PE=4 SV=1 |
A0A1E3PEW3_9ASCO | 51.83% | 355 | 9e-117 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_84012 PE=4 SV=1 |
A0A167D9M1_9ASCO | 47.65% | 361 | 8e-99 | Npl6p OS=Sugiyamaella lignohabitans GN=NPL6 PE=4 SV=1 |
A0A1E4TLH4_9ASCO | 53.96% | 265 | 2e-95 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_19205 PE=4 SV=1 |
Q6CC56_YARLI | 51.36% | 294 | 6e-90 | YALI0C12342p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C12342g PE=4 SV=1 |
A0A1D8PG62_CANAL | 37.95% | 361 | 1e-64 | Npl6p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NPL6 PE=4 SV=1 |
RSC7_YEAST | 34.55% | 356 | 8e-55 | Chromatin structure-remodeling complex subunit RSC7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NPL6 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1872
Predicted cleavage: 11
Protein family membership
Domains and repeats
None predicted.
Detailed signature matches
Protein sequence
>MCA_02423_1 MARKRKGRRSKSASQPEDDPEIENEAVASPTSADPSQEHGEEPEQEPEVEPEPEPPVVATPVKGRRGRPPGSKNKVNLHD PSTLTRSTRRSTPLSSRPSSRKSGTPTPLAETNDTKMNDDDNDDDSADTKRKSEDKQESGEEAKDKSDAENNEESNDLPL DEPSIPSPSVHTPGRRGRKGNRWGARGKPKTGSAHLSTTHTDPQGNAYIVENDEIVLPSNPKGDAKVDALGHLSGNREYR VRTFTVQGRGNRLYMLSTEPARCMGFRDSYLLFQKHKRLHKIIATEEEKYDLIKRQIIPHSYKGRAIGIVTARSVFREFG AKIIVGGRRIIDDYDEEESLQLGYKEGEIADPSDRMPPPGTPYNKNQYVAWHGASSVYHTQSAYAPMNTRESASSYKESY AKRKKIVVTDENWMYEHANAASVYNHEIYERRKRICTYNSENQSISGLYNGYTGLQFFPAATQPKRAHFVKAKDIVDNET LEHLGLLKPEDNSSTVVVPENNRKSQFVPHPQIAIETIVELHSPLVPRTGLKDVPEHIFENVPDEIKQAILTQQRIEREA E
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.