Protein
MCA_02415_1
Length
277 amino acids
Browser: contigB:1223960-1224794-
RNA-seq: read pairs 720, FPKM 32.0, percentile rank 54.5% (100% = highest expression)
Protein function
| EGGNOG: | 0PKXR | PGUG_04236 | NA |
|---|---|---|---|
| SGD closest match: | S000005879 | YOR352W | Uncharacterized protein YOR352W |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01163_1 | 42.61% | 230 | 1e-53 | MIA_01163_1 |
| A0A0J9XGV7_GEOCN | 34.63% | 231 | 1e-32 | Similar to Saccharomyces cerevisiae YOR352W TFB6 Subunit of TFIIH complex OS=Geotrichum candidum GN=BN980_GECA15s02749g PE=4 SV=1 |
| UniRef50_A0A0J9XGV7 | 34.63% | 231 | 2e-29 | Similar to Saccharomyces cerevisiae YOR352W TFB6 Subunit of TFIIH complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XGV7_GEOCN |
| A0A060TAC0_BLAAD | 33.48% | 227 | 6e-31 | ARAD1B06116p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B06116g PE=4 SV=1 |
| A0A167DVD3_9ASCO | 27.68% | 224 | 2e-21 | TFIIH complex subunit TFB6 OS=Sugiyamaella lignohabitans GN=TFB6 PE=4 SV=1 |
| YO352_YEAST | 31.75% | 274 | 1e-20 | Uncharacterized protein YOR352W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR352W PE=1 SV=1 |
| A0A1E3PS43_9ASCO | 27.27% | 165 | 1e-09 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_44856 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0626
Protein family membership
- General transcription factor TFIIH, subunit Tfb6 (IPR031349)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_02415_1 MSSMDHDEVMDDAPPTENGKSEESNTIEIRMKRETHEPTAEPPKRRASQVSVLSERQQTKLLQFFEDQRLNIQRRYVSRL SPPNGYENMGQLLSEMNKLIDIIWYSIMRSKPLDENTEDEVMEEAAAAAAASGTENEKEGLHIQMFGQIHHLLGIADNLN DYIEGYGKNLDPEATLKTLKKLDNLFSFLLGGKTESKRIVEVTQEEEENVDEDMEGGFVKEKPPVAELPNRLTRTEMVRL ESIAERARVIMSLACEGMDEYEDGVSRVYEKLLDKIT
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.