Protein

MCA_02410_1

Length
251 amino acids

Gene name: CIR1

Description: Probable electron transfer flavoprotein subunit beta

Browser: contigB:1195533-1196361-

RNA-seq: read pairs 3101, FPKM 152.0, percentile rank 85.1% (100% = highest expression)

Protein function

Annotation:CIR1Probable electron transfer flavoprotein subunit beta
KEGG:K03521fixA electron transfer flavoprotein beta subunit
EGGNOG:0PFI6FG09555.1Electron transfer flavoprotein
SGD closest match:S000003439CIR1Probable electron transfer flavoprotein subunit beta
CGD closest match:CAL0000176104CAALFM_CR09510CAUncharacterized protein

Protein alignments

%idAln lengthE-value
A0A0J9XD59_GEOCN82.00%2502e-128Similar to Saccharomyces cerevisiae YGR207C CIR1 Mitochondrial protein that interacts with frataxin (Yfh1p) OS=Geotrichum candidum GN=BN980_GECA10s02815g PE=4 SV=1
MIA_04861_175.90%2494e-118MIA_04861_1
A0A161HJR1_9ASCO72.29%2497e-113Cir1p OS=Sugiyamaella lignohabitans GN=CIR1 PE=4 SV=1
A0A1E3PIW9_9ASCO70.16%2484e-110Electron transfer flavo protein, beta subunit OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47073 PE=4 SV=1
UniRef50_A0A1E4SJD871.31%2445e-98Uncharacterized protein n=1 Tax=Candida tanzawaensis NRRL Y-17324 TaxID=984487 RepID=A0A1E4SJD8_9ASCO
A0A1D8PTZ6_CANAL66.80%2596e-105Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR09510CA PE=4 SV=1
A0A060TAB4_BLAAD67.20%2502e-103ARAD1C44462p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C44462g PE=4 SV=1
Q6CBA9_YARLI68.55%2483e-97YALI0C20449p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C20449g PE=4 SV=1
A0A1E4TF99_9ASCO64.52%2482e-94Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31354 PE=4 SV=1
ETFB_YEAST60.71%2522e-89Probable electron transfer flavoprotein subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CIR1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.8323
Predicted cleavage: 14

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 251

Detailed signature matches

  1. Family IPR012255
    Electron transfer flavoprotein, beta subunit
    1. PIRSF000090 (Beta-ETF)
  2. Domain IPR014729
    Rossmann-like alpha/beta/alpha sandwich fold
    1. G3DSA:3.40.50...
  3. Domain IPR014730
    Electron transfer flavoprotein, alpha/beta-subunit, N-terminal
    1. PF01012 (ETF)
    2. SM00893 (ETF_2)
  4. Domain IPR033948
    Electron transfer flavoprotein, beta subunit, N-terminal
    1. cd01714 (ETF_beta)
  5. SITE IPR000049
    Electron transfer flavoprotein, beta-subunit, conserved site
    1. PS01065 (ETF_BETA)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF52402 (Adenine n...)

Residue annotation

  1. Ligand binding sit...

Protein sequence

>MCA_02410_1
MSLRILVPVKRVIDAGVRPRINKTNSGVETQGVKFSMNPFCEIALEEAVKLKEGNKGLVKDIHAVSIGPLKAQDILRTAL
AKGADTSTLIDTGKDELEPLAIAKLLQKVVEKKESNLILLGKQSIDDDSNQTGQILAGLLKWPQATNASKVVVEGEKVTV
TREVDGGEETIAAKLPMIITTDLRLNEPRYATLPNIMKAKKKPLEKAKPADFGVDVKSKLEILSVDYPPTRSAGTILGST
EELAEKLKSLV

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0009055 electron carrier activity

Cellular Component

None predicted.