Protein
MCA_02386_1
Length
1,146 amino acids
Gene name: CTR9
Description: RNA polymerase-associated protein CTR9
Browser: contigB:1128526-1132103+
RNA-seq: read pairs 3394, FPKM 36.6, percentile rank 58.3% (100% = highest expression)
Protein function
| Annotation: | CTR9 | RNA polymerase-associated protein CTR9 | |
|---|---|---|---|
| KEGG: | K15176 | CTR9 | RNA polymerase-associated protein CTR9 |
| EGGNOG: | 0PISN | PGUG_03501 | RNA polymerase II transcription elongation factor (Ctr9) |
| SGD closest match: | S000005505 | CTR9 | RNA polymerase-associated protein CTR9 |
| CGD closest match: | CAL0000184138 | orf19.7067 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03163_1 | 66.26% | 898 | 0.0 | MIA_03163_1 |
| A0A0J9XET4_GEOCN | 60.93% | 878 | 0.0 | Similar to Saccharomyces cerevisiae YOL145C CTR9 Component of the Paf1p complex OS=Geotrichum candidum GN=BN980_GECA11s00824g PE=4 SV=1 |
| A0A161HKJ1_9ASCO | 49.27% | 885 | 0.0 | Ctr9p OS=Sugiyamaella lignohabitans GN=CTR9 PE=4 SV=1 |
| UniRef50_A0A161HKJ1 | 49.27% | 885 | 0.0 | Ctr9p n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A161HKJ1_9ASCO |
| A0A1E3PI94_9ASCO | 47.07% | 886 | 0.0 | TPR-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51752 PE=4 SV=1 |
| A0A060TD88_BLAAD | 46.84% | 903 | 0.0 | ARAD1D41162p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D41162g PE=4 SV=1 |
| A0A1E4TKC5_9ASCO | 40.38% | 894 | 0.0 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_16634 PE=4 SV=1 |
| Q6CGV9_YARLI | 38.29% | 875 | 0.0 | YALI0A15686p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A15686g PE=4 SV=1 |
| A0A1D8PQM5_CANAL | 32.86% | 919 | 1e-153 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7067 PE=4 SV=1 |
| CTR9_YEAST | 31.43% | 913 | 2e-132 | RNA polymerase-associated protein CTR9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTR9 PE=1 SV=3 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0582
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Repeat
-
Repeat
1
200
400
600
800
1000
1146
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
PF13432 (TPR_16)
-
mobidb-lite (disord...)
Protein sequence
>MCA_02386_1 MASPQYDMLEEAGEDVALNNPNIVEIPVAGGEVVTLDLLNDISDDPFEICVLLENEKTEHNIWLAIAAAYSRLGQIDNAI GVVTRGINSPIFNSDEERLPFLSFLIWLYFWKMRDAPNFETEETVAAELKTKSEYHKLATSLANKIIQLDHSSSVTFLAR GELGLLTGDFEKSMEPFKMVLDASNDSNLFGQLGRARILYHNKNYKGALKIYQGILKSRPDFQPDPRIGIGLCFWHINEK DMALAAWQRALELRPESIPVNVLLGLYYMDEAVKNPDDPSFAATYIKALKYTQTAYKLNKNYPAADLVIASYLFSKKDID SVIKLAERAVQYSNVKSIQSDAYFWMARAYHYLDNLPEALKYYTMAEKENPNNLVAKIGKGLVQMAQNDNESLMTFESIV KKHSKSTEALFLLALYYVQRWQSNPMVSEKEYKDRAVVYLEKFMRMTKEQDEAPPIEALLTLAKLTEDKNITASLNTLND VIQLLTSQEIPVNAELYNNIGVLHYTKGSYESARTFFDLAKTAVENGHSYHGEDIKTSINFNIARLEDASGNIEEAKRLY AEILETHPDYLSARIRSVYLSLALGEPDSPEKIKELMSQHSDDVEVRALYGYYLKRQKRPPSKSLTTDIEMKHHKTTLEK YEKFDTYALVAIGNMYLTVARSLKINSSNDVKKKEWTYYKAAESFERALQVDKYNAYAAQGVAIIFAETKQSDKALQIFS KIRETLNDVSIYVNMGDCLVDLRQYSKAIESYEIALNRFHNGEDLQLFILLGRAWYARGMSEKNFEALKKSLFYSEKAFE GLPENTSLKFNVAFVRFQMAEFILRLPERQRTIIDIEKAIKGLDSAIEYMEEIAGARHPPFPPEEIQQRIKMGKNTTKKQ LERALVEQKEFELKFQDKIEEARKIREAEKAKLEMERKAKAEAEAERQAALLKERLALQEQAREWTEQAAQAAIEAEDQD GDEGENKRSKSKRTSRKSGGGSKKEGKGRKRRSKKSNPVDSEEEEEAQYNDSEPEREREVRKKSSSNSKKQFKSVSDIED SDDGLDEVDAREALNVQSMEANRKTIEEDEEPEIKEPRKRLRKANFQEEEEEEEPEDYDEDQEKGDDDDDDDSRKRSPEE DEASAGSNKKRRLGRVIDDDEDEEMD
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.