MCA_02346_1

Browser: contigB:1014606-1018906+

RNA-seq: read pairs 4, FPKM 0.0, percentile rank 2.1% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0141

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   22 - 1,412

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   17 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   6 - 16

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 21

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   30 - 49

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   750 - 1,172

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,221 - 1,254

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_02346_1
MVGKSALLALTAILSAHHAFALPAADSKSGTLDKVEDNDLPIETPLPSIPEPLPVILDEPPKEELDKSIEEVTTELDIPS
ESISFEIISAKPSVDPAKDTNIPAVTEVQTITPTFDTAERFTSSLKPEELAGKPVADDEKTACLNVCADALFLSSLEEGN
ICDSKATDGFYHAAQRCAKCICGIWSYVPDRSILTSKMEKCGINVPKCNPKDSNMITKRAIDVEENDLQKRCLIWITTTI
YQKPPTYPRGCAPGYNRKIVKYPAKNIPSKLCYGHIVTYYPPLRVPATVITRPPCSKRRTVTYVPKSPPANIPKCQPGYN
KGVIKVPGKVFPAKTVTNGAVVSVHVYRSYAPRQVTIGPCKTRRTVYVTRTRPPIQQTCNPGYNSGYIKQPITKLPRKVQ
TGNNDVVTVYVAINFPPRTKAVPGCKKRKTVWVTPKRPPFKPTCAPGFDSKNTWVPAKSFFRRVVTGANEVVTIHAAITY
PGHNKVLPGCKTRKTVSTTPASPPPNVKCNPGYQTKVSVIPAHTFKRKVHTGNNGVVTVQIPYTWYKRTTTLAACTKQNT
VTVTPPSPPFNVKCAPGYQTKQTVVPARTYARKVVTGNNKIVTVSIAYTWFARTTTLDPCDKRKTVTVTPPSPPFNVKCA
PGFKTKETVVPPHTFARNTITGKDNVVTVSVGYTWYQWTKTLPPCTQRSTTTTYRTTPCRPNGCNPGYKKTSSTIPAVTY
SASTETGNNGVVTVWKSTTYPAFVTTIPPCEERKTTTGPPASKTHEVPPCVEGTESGTYTIPGENVPETTETGTDNTVTI
RPSTSYKSSTTMLPGCTPKPSITESEDTPEPTGPGGNDTESVDEPSSTSPPDSESTESEDTPEPTESEDTPEPTKSENTP
EPTESEDTPEPTESEDTPEPTGPDGNDTESVKESSTTSPDSEPTESEDTPEPTGPDGNDTESAEESSTTSSDPEPTESED
TPEPTESEDTPEPTKSENTPEPTESEDTPEPTESEDTPEPTGPDGNDTESVDEPSSTSPPDSEPTESEDTPEPTGPDGND
TESAEESSTTSSDPEPTESELSESTTGTDLLPHETESNSVPTVTSPYPPPTPTETCAHGTSSGDVTVPGSSYPGTTTTGD
DSTVTVYPPTEYPQTTTMLPGCVPSEGVNSEVSSETEPNQPEPTENGPTSTTTIPYYNLPSLTCVEGTNSSPVTLPATSF
PEEITTGSDNVVTIHPSTEFPETTTMLPGCTPGEGSQQSTSSADNGTPPTGTSTKCGSGMCTCVPKPPVCVTYDVYKAFY
CGEWILYKICNTFGFIGCGYDHYQKRDVKEEQVVKAAAAVIPTISAATTTITDIEENLATALVDEDKSKKIVNAVIDSLK
KSEPTAEAIKVMDPSEIDFAKIEQPKLVEKVTILQGTALNTAILTSTPTPTA

GO term prediction