Protein

MCA_02332_1

Length
1,731 amino acids

Gene name: SCC2

Description: Sister chromatid cohesion protein 2

Browser: contigB:962772-968190+

RNA-seq: read pairs 660, FPKM 4.7, percentile rank 16.9% (100% = highest expression)

Protein function

Annotation:SCC2Sister chromatid cohesion protein 2
KEGG:K06672SCC2 cohesin loading factor subunit SCC2
EGGNOG:0PHGBSCC2Sister chromatid cohesion protein
SGD closest match:S000002588SCC2Sister chromatid cohesion protein 2
CGD closest match:CAL0000175980orf19.3080Cohesin-loading factor complex subunit

Protein alignments

%idAln lengthE-value
MIA_01130_147.78%16890.0MIA_01130_1
A0A0J9X3W9_GEOCN45.71%14920.0Similar to Saccharomyces cerevisiae YDR180W SCC2 Subunit of cohesin loading factor (Scc2p-Scc4p) OS=Geotrichum candidum GN=BN980_GECA02s05598g PE=4 SV=1
UniRef50_A0A0J9X3W945.71%14920.0Similar to Saccharomyces cerevisiae YDR180W SCC2 Subunit of cohesin loading factor (Scc2p-Scc4p) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X3W9_GEOCN
A0A1E3PHS6_9ASCO34.12%13190.0Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51575 PE=4 SV=1
Q6CGZ4_YARLI31.48%13122e-164YALI0A14707p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A14707g PE=4 SV=2
A0A060T857_BLAAD26.58%12043e-104ARAD1D08206p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D08206g PE=4 SV=1
A0A1D8PMS8_CANAL22.65%11171e-62Cohesin-loading factor complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.3080 PE=4 SV=1
SCC2_YEAST24.15%12426e-60Sister chromatid cohesion protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SCC2 PE=1 SV=1
A0A167FJI3_9ASCO25.34%12397e-58Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_3008 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0064

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Repeat
1 200 400 600 800 1000 1200 1400 1600 1731

Detailed signature matches

  1. Domain IPR016024
    Armadillo-type fold
    1. SSF48371 (ARM repeat)
  2. Domain IPR011989
    Armadillo-like helical
    1. G3DSA:1.25.10.10
  3. Domain IPR024986
    Sister chromatid cohesion C-terminal domain
    1. PF12830 (Nipped-B_C)
  4. Repeat IPR026003
    HEAT repeat associated with sister chromatid cohesion protein
    1. PF12765 (Cohesin_HEAT)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. Coil
  3. NON_CYTOPLASM... (N...)
  4. TRANSMEMBRANE (Tran...)
  5. mobidb-lite (disord...)

Protein sequence

>MCA_02332_1
MSRNGHISAPTEPKEALQYTPLISILPIQSASHSFPLPEAGLPNEPLQFLSKEEQDLATQNYDKINAPIQTQEQQLAFDQ
ASNKILEKISSTDLSYVIQSKFKHYDFPKVSENQETRPVFLSPLATNIYINSKLKYEVAPPIVKQRTMTHIPPPRPEIRQ
EPYSIPENDPLTSIQPDVSSSTNSKSTTDSSSMKIKKRKVQDGKTKIRKTEQSFDDLLNSIFQSDDYFSTSKEIQNYNDS
SISIWFTLSDPDKPPCLSNAVLVTLEDNIRKFSSSKFFKTYDVEYLVRLISILERSILNGQNNILSPDDLLSSKSDDIAK
SNTIILDNTLKAIKLLFRICLSGRKDNELFSEDLLNLTISVVAEILEKEILPLYEMELGNHPLMKSKTLFGGVCQDLTRV
IDLISGFLERELPLGEPSIIKLEFLTIKIIFSTTTAKLKDQLITPAIMESFKVSTMMLISTLFGQFPDQRSFLLDEILNN
FTNLTGGKSSRVFRTSNGISIQLVTALIIRLIQTTGSTNDSLFCMTDLDELDEETKNEKRKSLLELCTKRYSSAASNAKE
ILSYLITRAMKTTKSGNLPFRSLIETFTEDFGKLLKSPEWPAAELFLTTLSMALITILEGDKDGVTASTMALELLGNIQL
ILRPFKENEKQPHIELALNMDLSDFEKFSTICSGILYYLQSLINKDPTLTTSYQYFISVFGSILSSLWNGTKNEEEHQLH
ESVSKCIDHILTNGKEGTWIDYSPVIDATCDSSTLVEQSYEQFLHSRNLVSIYDRILNSILKSLDHPKINIRTKSLRVVA
SLLDHAPDIFSMPQVQKSLSDRIVDVSAQVRDASVDIVGKFIVMKPQYARNFYLILCDRSSDTGLAVRKRVIKLLRDLYD
LVDEEMRVNIIDRIMRRVDDEEKVISDMALSFLTECLFPPLKPSQSDNKKENSNNTIVNQYERQKVTSSVTAILEALSSR
GDKQVRFLREFFLKVLHPVKGSANSQVIETAKGLVEDLVEQASQAQNIKVSERLLGILSDIVNANGSFMTQDPLSLLSGF
FVDESAEAQVACFHALSIYHKTLLKVGKLRDKFLEQIKGILLKRLNKFNLQELSEAVPCLWIACQMSNDTKKLAIVAVSC
FRAIKPYYEKAVAKKEVPNDPKLTKLLYLLSCIGRYCVLEDHIAKFDSYQPKQKLKTVVDLILQYLLMFCGPSQSVHTRK
IVLKNICAVCIGHPTKFMIKAVIKLLDQVFAGTEEELQETLMRSFLELLYHEEDTANAIAAMKNTKKTDDIDLGIFYGVT
DKLRNEGVSSSIMQRYQDKIMEFAMRGESDFSLTASLLLEKITRQGLANIRLSVPAIVSLEMSRRKDISLVARNMHIKLF
EKYESLIEGCYVQGVRRAAEYRIQNSKDLLEEFDNFQILYPFMKNNRATKRKFLVGVTNSLEFNPENRDFKYLKSHLLYT
IFISNALSTVNFYTIEEVLTVIYGLNRLVLSIGVGINDEAESFIESLQKKVSQEPASQDNDTQMSSQVNNHDESTIIDDE
MALLESQTNAAVTMSLSSQFSPTEVNMAEKVEDTDKLKSLAIICIIIRIILSLKGFLAKCYHIKDHTSQNFNPDKPGKDP
KPATRRTNASCVKLDIKSALSDKLNDDFEIPVSNVHRVIKFVEYSSVAINEEDNSSDGEGATNDNDGSMAQTDFDSTLIG
SSNATAKKSNSMTTSKKRAANSVTSSDATTNNKPKRAKHEPDYRDDDVVLL

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005488 binding

Cellular Component

None predicted.