Protein
MCA_02302_1
Length
198 amino acids
Browser: contigB:884908-885740+
RNA-seq: read pairs 373, FPKM 23.2, percentile rank 45.4% (100% = highest expression)
Protein function
| KEGG: | K13107 | RBMX2 | RNA-binding motif protein, X-linked 2 |
|---|---|---|---|
| EGGNOG: | 0PJVW | FG09419.1 | U2 snRNP component IST3 |
| SGD closest match: | S000001444 | IST3 | U2 snRNP component IST3 |
| CGD closest match: | CAL0000185401 | orf19.1045 | U2 snRNP complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01147_1 | 50.00% | 192 | 4e-59 | MIA_01147_1 |
| A0A0J9XHR2_GEOCN | 46.23% | 199 | 4e-51 | Similar to Saccharomyces cerevisiae YIR005W IST3 Component of the U2 snRNP, required for the first catalytic step of splicing and for spliceosomal assembly OS=Geotrichum candidum GN=BN980_GECA15s01913g PE=4 SV=1 |
| UniRef50_A0A0J9XHR2 | 46.23% | 199 | 9e-48 | Similar to Saccharomyces cerevisiae YIR005W IST3 Component of the U2 snRNP, required for the first catalytic step of splicing and for spliceosomal assembly n=7 Tax=Eukaryota TaxID=2759 RepID=A0A0J9XHR2_GEOCN |
| A0A060T634_BLAAD | 64.04% | 114 | 3e-49 | ARAD1B07942p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B07942g PE=4 SV=1 |
| A0A1E3PJN6_9ASCO | 66.36% | 110 | 1e-44 | Kinase-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50843 PE=4 SV=1 |
| IST3_YEAST | 56.36% | 110 | 3e-42 | U2 snRNP component IST3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IST3 PE=1 SV=1 |
| A0A1E4TGK1_9ASCO | 58.72% | 109 | 1e-41 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_17378 PE=4 SV=1 |
| Q6CBR2_YARLI | 58.33% | 108 | 5e-39 | YALI0C16368p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C16368g PE=4 SV=2 |
| Q59VP9_CANAL | 47.41% | 116 | 3e-31 | U2 snRNP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.1045 PE=4 SV=1 |
| A0A167CJL6_9ASCO | 39.51% | 81 | 1e-12 | Rna15p OS=Sugiyamaella lignohabitans GN=RNA15 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2464
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
20
40
60
80
100
120
140
160
180
198
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd12411 (RRM_ist3_like)
Protein sequence
>MCA_02302_1 MTTLNTRQVEQLSKKELDAGILDVKQSWHWDYNDTAFIFFGNFHLGLTEGDILTIFSQYGTPIFIKLIRDKETGKSKGFG FLKYADQRSTVLAVDNLNGTTILGRTIRVDHTRYTLKEDEETEEEYEQICQTVLKLGREDLFLRKKQQRMIADTNKGQQS NKLIKDRVESTDQKEIVKTLDDLEKEEADPMAAYLRKK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.