MCA_02298_1

Browser: contigB:853019-857233-

RNA-seq: read pairs 593, FPKM 5.3, percentile rank 18.0% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0375

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   22 - 1,382

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   15 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   6 - 14

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 21

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   643 - 1,249

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_02298_1
MVAKPIVLALAALLSSHGVQAIPADLLSSSGEVTLEVTFNTKDKAESIEVNPVESSIVEDKVKEVVVTSPIPVIVETSSV
SLSPAELTSGPVAQESEVECLNVCANAVFLAALEGQTCDSKDENSFYNVAKKCSQCACKIWAVFDDKNDFIKGLNKCNLP
VPKCNLKDSARITQRAIAVDESLEDGSEQLEKRFLLGAVANIIANKKQKLEKCLIKKTVTCQRRRPPITKGCNPGCKTKK
VIYKRVSLPASKCYGLVVTYYPPVVWPQTTVIQKPCKPLKTRIIKPTRPQIIIRPTCNPGYNTKVIRVAGKVVRETRITN
GCTVTVRKYASFPPFTTTVRPCTTRRTVTRTPTRPPFKPTCAPGDKQKKTWVPGYNFNRRTATGANKVVTIFVAKKYPGH
YTVLKPCITRQTVTRTPTRPPFKPTCAPGNKQKKTWVPGYNFNRRTTTGANKVVTIFVAKKYPGHYTVLKPCTTRNTVTR
TPTRPPFKPTCAPGDKQKKTWVPGYSFKRRTVTGNNKIVTIYVAKKYPGYNTVLKPCTTRNTVTRTPTRPPFKPTCAPGD
KQKKTWVPGYNFKRRTVTGNNKIVTIYVAKKYPGYNTVLKPCVTKVTTTVPYPPPTVTKTCVPGTVSKTVTIPGTKYPGK
TVTGSNGIVTVRPPTSFPPSKTKLPGCSKPGSSSKSTRPPTGTTIPPAQETVTISYPPPTPTETCAVGTNSKPVTVPGTS
YPGTTVTGDDGTVTVRPPTSFPPSTPMLPGCTTPGGESSGPAESSTEPPAESSTEPPAGSSTEPPTDGESSETSDESSTE
PPAESSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTE
PPAESSTEPPAESSTEPPAESSTEPPTDGESSTEPPAESSTEPPAESSTEPPTDGESSTEPPAESSIEPPAESSTEPPAE
SSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTEPPAESSTEPPTD
GESSETSDESSTEPPAESSTEPPAESSTEPPAESSTEPPTDGESSTEPPAESSTEPPSDQETVTVSYPPPTPTETCAVGT
NSKPVTVPGTSYPGTTVTGDDGTVTVRPPTSFPPSTPMLPGCTTPGGESSETPTSMHPTQTPTSDPSESLSSDTGNPSST
TTSSPLSSDSNEPATSTGSSPSGTITSSTSKPSVSGTGTPTTSCSDSKCTCTPQPPVCVTYDIYKAYYCGEWILYKVCST
FAFIGCGYDHISKRDLPASLEARTTTLSNLPKAVATAVVDTPKAEKIVDSALEALKRKEGKVKVMDVKDIDFSLIEKPRV
VSRIDKIATIKATAIVAATRAV

GO term prediction