Protein
MCA_02287_1
Length
312 amino acids
Gene name: RRP17
Description: Ribosomal RNA-processing protein 17
Browser: contigB:807370-808450+
RNA-seq: read pairs 646, FPKM 25.5, percentile rank 48.1% (100% = highest expression)
Protein function
| Annotation: | RRP17 | Ribosomal RNA-processing protein 17 | |
|---|---|---|---|
| KEGG: | K14851 | RRP17 | ribosomal RNA-processing protein 17 |
| EGGNOG: | 0PN1C | RRP17 | ribosomal RNA-processing protein 17 |
| SGD closest match: | S000002820 | RRP17 | Ribosomal RNA-processing protein 17 |
| CGD closest match: | CAL0000175073 | orf19.5066 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03860_1 | 47.60% | 313 | 2e-47 | MIA_03860_1 |
| A0A060T8T0_BLAAD | 42.39% | 184 | 8e-18 | ARAD1C31746p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C31746g PE=4 SV=1 |
| UniRef50_A0A060T8T0 | 42.39% | 184 | 2e-14 | ARAD1C31746p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T8T0_BLAAD |
| A0A0J9XF05_GEOCN | 60.00% | 55 | 3e-14 | Similar to Saccharomyces cerevisiae YDR412W RRP17 Component of the pre-60S pre-ribosomal particle OS=Geotrichum candidum GN=BN980_GECA12s03849g PE=4 SV=1 |
| A0A1E3PKT2_9ASCO | 57.89% | 57 | 2e-13 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52039 PE=4 SV=1 |
| RRP17_YEAST | 57.14% | 56 | 1e-12 | Ribosomal RNA-processing protein 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP17 PE=1 SV=1 |
| Q6CD25_YARLI | 62.26% | 53 | 3e-12 | YALI0C04345p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C04345g PE=4 SV=1 |
| Q5A796_CANAL | 50.00% | 58 | 6e-08 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5066 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.6278
Protein family membership
- Nucleolar protein 12 (IPR019186)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF09805 (Nop25)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_02287_1 MGPVRTNREILTRGTEVYAKKQKRKAIGVEEIKYDQDARKEYLTGFHKRKLERKQHAQEVAKKRAREERLEERRRIREER KAQLQKDLEVYRAAYSGTNLIDIDELDTNSSRKSKKKSKKQDEDEDENSNSEEEYSDWEGIKESDEGSSESKSGILKKKQ IFEAEDSDDEETTVVVEQIDPEAIPTTGRANNVFPEMSKQVLQASLQKAKQAALMAWMYGFPEPSVYRDENDPLGLSDSE DDSESGSKESASKNGKKVEISLDEFKNKRRDDSNNQKKKKKKAKYLSKTERLQNVKKERNRSAEKRRRAKDK
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.