Protein

MCA_02260_1

Length
108 amino acids

Browser: contigB:740896-741373+

RNA-seq: read pairs 775, FPKM 87.9, percentile rank 76.8% (100% = highest expression)

Protein function

KEGG:K03104SRP14 signal recognition particle subunit SRP14
EGGNOG:0PTKUSignal recognition particle 14kD protein

Protein alignments

%idAln lengthE-value
MIA_03967_158.51%944e-27MIA_03967_1
A0A1E3PIF2_9ASCO45.63%1036e-25Signal recognition particle, SRP9/SRP14 subunit OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83267 PE=4 SV=1
A0A060SX43_BLAAD43.16%959e-22ARAD1A01617p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A01617g PE=4 SV=1
UniRef50_A0A060SX4343.16%952e-18ARAD1A01617p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060SX43_BLAAD
Q6C0K0_YARLI26.88%932e-06YALI0F24013p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F24013g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1096

Protein family membership

Domains and repeats

  1. Domain
1 10 20 30 40 50 60 70 80 90 100 108

Detailed signature matches

  1. Family IPR003210
    Signal recognition particle, SRP14 subunit
    1. PF02290 (SRP14)
    2. PD009170
  2. Domain IPR009018
    Signal recognition particle, SRP9/SRP14 subunit
    1. SSF54762 (Signal re...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.30.72...

Protein sequence

>MCA_02260_1
MGKLSNDEFLQRIEQLLLESKSTGSIYLTQKRYAPKDEVTGERAISNSLIFRATDGKSDKRKRIKFSTVVKAEDVGDFFV
KYTEVVKSGVTGLRKKDKKKNKKQAAKK

GO term prediction

Biological Process

GO:0006614 SRP-dependent cotranslational protein targeting to membrane

Molecular Function

GO:0008312 7S RNA binding
GO:0030942 endoplasmic reticulum signal peptide binding

Cellular Component

GO:0005786 signal recognition particle, endoplasmic reticulum targeting
GO:0048500 signal recognition particle