Protein
MCA_02223_1
Length
476 amino acids
Browser: contigB:650671-653120-
RNA-seq: read pairs 4798, FPKM 124.3, percentile rank 82.3% (100% = highest expression)
Protein function
| EGGNOG: | 0PGT2 | pre-RNA splicing factor Srp2 | |
|---|---|---|---|
| SGD closest match: | S000002840 | NPL3 | Nucleolar protein 3 |
| CGD closest match: | CAL0000201005 | NPL3 | mRNA-binding protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03965_1 | 71.76% | 85 | 7e-36 | MIA_03965_1 |
| A0A060T2G4_BLAAD | 42.47% | 73 | 1e-14 | ARAD1A01584p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A01584g PE=4 SV=1 |
| UniRef50_A0A060T2G4 | 42.47% | 73 | 3e-11 | ARAD1A01584p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T2G4_BLAAD |
| Q6CA64_YARLI | 42.50% | 80 | 6e-14 | YALI0D05547p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D05547g PE=4 SV=2 |
| A0A0J9XFJ4_GEOCN | 37.97% | 79 | 1e-13 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA13s02782g PE=4 SV=1 |
| A0A167CUY3_9ASCO | 41.03% | 78 | 3e-11 | mRNA-binding protein NPL3 OS=Sugiyamaella lignohabitans GN=NPL3 PE=4 SV=1 |
| NOP3_YEAST | 37.88% | 66 | 4e-08 | Nucleolar protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NPL3 PE=1 SV=1 |
| A0A1D8PFV4_CANAL | 33.82% | 68 | 3e-06 | mRNA-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NPL3 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1236
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
450
476
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_02223_1 MAVSDYRLFFKPCGSNYRMDEVTSEFSKFGALKEVKLLKGYGFVEFLHKEDAAAAVQSKISLHGENLSINYATRLSDRRD TGRSRHGRSERSERSERSQRSDRSDRDRSERRDRHDRRDRPDRLDRSERSQPVGEDLYRVQISGLAPDTKWKDLKDHFRK ANVTVSYTEVSRNGDGTGLVDVETQTDVDALLDQMQNTELLGNIITIHEDTITRKPREKPRESRDSRRRRDEPSNRRRER GGRDRDRSPRRERSPTRDRSRDRDRRDRGKDRDGRRRRGDDRRDVRGGRDNRDNRRSRSDNQERGGYRERDDRNDREEMD DRSDVEMNDNKGGSDDGMGGDDEYYDGKYEDPFTEDLSSKSNDNDSKPKDYGNDVPFDDIEDKNKQQEDVLIVKREHSGA KLETEMDLTETPQDKNRLSRRSSSTSNNRSTRSSRASNGNGNAKTEKENAADLQKAKAEDLANAPTPPGPPSDGEW
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.