Protein
MCA_02127_1
Length
640 amino acids
Browser: contigB:310457-312380+
RNA-seq: read pairs 1745, FPKM 33.6, percentile rank 55.8% (100% = highest expression)
Protein function
| EGGNOG: | 0QECC | CCCH zinc finger and RRM domain protein |
|---|
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03938_1 | 62.89% | 318 | 6e-90 | MIA_03938_1 |
| A0A0J9XBA4_GEOCN | 54.66% | 322 | 7e-73 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA07s05323g PE=4 SV=1 |
| UniRef50_A0A0J9XBA4 | 54.66% | 322 | 1e-69 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XBA4_GEOCN |
| A0A060T7L2_BLAAD | 44.71% | 331 | 8e-49 | ARAD1C22770p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C22770g PE=4 SV=1 |
| A0A167FP23_9ASCO | 45.56% | 90 | 1e-19 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_3157 PE=4 SV=1 |
| Q6CDX5_YARLI | 47.67% | 86 | 2e-19 | YALI0B20460p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B20460g PE=4 SV=1 |
| A0A1E3PPR6_9ASCO | 45.83% | 96 | 1e-18 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81908 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0647
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
640
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
cd12257 (RRM1_RBM26...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_02127_1 MVVQDFEAPKLQEWIVSHVSNYAEVDPDILGEYVIALLQHDEPIDHLKSMCLTDLRDFLHSNTEAFVDELFRIYVDKSYL NDPKPEPEQTQVFPGLNSLNSSNDNNNSEQPQQNNDQNSFQKHFNNNNQFDNNDNNNGNPNNFSFKNQGHNNNNNNFRGG RYNNRGGRFQRFNNNNGGFNNNNNNWGNNQAALAAAAAVLAANGNNGNIDPSVIQQMAATMGFQFNNNNNNKNFQNGFNG GNFNNNNNGFNPNFNKHNNNHNGNNNLKSNRNVLMEIATTQPDEEFVKRKLVIEKLPADKFNEEDLKNYFSQFGEITNLS LDHVNHLAELEYATHHEALAAWSSPAAIFDNRFVKVYWRKTDENDASENKDKIDVEAVKKVQAEKQKAFEEKMAKKKANQ EKLLEINRQKQKLLQLQKEQQEKLLQLAEKAGNSDEITSKKGTTAALQAQLDALKREAEQLGIPSSGAPAYNPYHGRGGF RGRGRAHHYSPYARPIRGGFSSSATSRYNLDLRPRTIEVKPVPADKEEAFRGYLLSMGEYEDLSRTDENTIQVTFKDRRT AETFYYSSKSISDVGEIEKAWKNTPTKPTTETKPPTTTSAPLDWSQSNATTTTTTPTTTSSNQTISSNVPGIADSVMDMS
GO term prediction
Biological Process
GO:0006397 mRNA processing
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.