Protein
MCA_02116_1
Length
792 amino acids
Gene name: NDC80
Description: Kinetochore protein NDC80
Browser: contigB:279158-281537-
RNA-seq: read pairs 632, FPKM 9.8, percentile rank 25.7% (100% = highest expression)
Protein function
| Annotation: | NDC80 | Kinetochore protein NDC80 | |
|---|---|---|---|
| KEGG: | K11547 | NDC80 | kinetochore protein NDC80 |
| EGGNOG: | 0PG2Z | NDC80 | Acts as a component of the essential kinetochore- associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity (By similarity) |
| SGD closest match: | S000001406 | NDC80 | Kinetochore protein NDC80 |
| CGD closest match: | CAL0000189198 | NDC80 | Probable kinetochore protein NDC80 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A167FTK1_9ASCO | 28.66% | 764 | 2e-74 | Ndc80p OS=Sugiyamaella lignohabitans GN=NDC80 PE=4 SV=1 |
| UniRef50_A0A167FTK1 | 28.66% | 764 | 5e-71 | Ndc80p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167FTK1_9ASCO |
| A0A0J9XHS6_GEOCN | 29.60% | 642 | 1e-65 | Similar to Saccharomyces cerevisiae YIL144W TID3 Component of the evolutionarily conserved kinetochore-associated Ndc80 complex (Ndc80p-Nuf2p-Spc24p-Spc25p) OS=Geotrichum candidum GN=BN980_GECA18s00362g PE=4 SV=1 |
| MIA_05469_1 | 29.06% | 554 | 4e-55 | MIA_05469_1 |
| A0A060T258_BLAAD | 28.60% | 570 | 1e-52 | ARAD1C22528p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C22528g PE=4 SV=1 |
| NDC80_YEAST | 26.62% | 586 | 5e-40 | Kinetochore protein NDC80 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NDC80 PE=1 SV=1 |
| NDC80_YARLI | 26.19% | 569 | 2e-33 | Probable kinetochore protein NDC80 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NDC80 PE=3 SV=1 |
| A0A1E3PPR7_9ASCO | 27.27% | 506 | 8e-30 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49860 PE=4 SV=1 |
| A0A1E4THJ1_9ASCO | 25.00% | 636 | 3e-28 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31927 PE=4 SV=1 |
| NDC80_CANAL | 50.42% | 119 | 7e-28 | Probable kinetochore protein NDC80 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NDC80 PE=3 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9878
Predicted cleavage: 196
Protein family membership
- Kinetochore protein Ndc80 (IPR005550)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF03801 (Ndc80_HEC)
-
no IPR
Unintegrated signatures
-
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_02116_1 MSFPTGPPGSNSSNKPTNRASLIPSSISRPSTVRSLNGPPMSVARHSMINSNSNIGLSMPQRGPFNSRSSIAPGSSRQSA FGTPGYQYNPSSARAPPSFSNNSFQQQQIYGSGGNNSTFNDSFNQPYISGTTGSSVPEMVAASMQRTNVRRSTLNPGNAS INGIRKNPRQSYLPNTRPRKSVAPIPSTPLSSARSTVDKKQQTQMQQHIEQFLQANDFEKETQITITPKLLKSPEQKNFV TMFKWLYHRIDPGYLFTKSIESELFFLLKTLNYPNLDSINKSQASAVGGFQWPSYLAMLYWLVQLIESLETQPYSLSKIL DGQQAEESLDQLDSPIDYLHLSFQLRAYKRFLANRDYESDVIIEEMNERLQEYIKPELDKQEQIQNEIAQMQEELEKKST EDDIENLETLSAHLTLDTNNYEEYLKSYEQKFQKRKATNERLAEKIQLTEEQLNQTRLENQELKDNLKANGKDLETIDNL NSQLAEYRAQKQELELEAEEISNTLTKRREEATEILKEIEARHRKYNELVQYIKHDVRGSSILKKKLEEDPTFFDITLDS PLADENLGKSMLELLKGKDFYNAIRPILIECRKEIGENIHATSEEVIKNQERFDRLSESLREKTEQLDTLENRLNMANAT YKTKYDTYNNDQQAYKLEIETLEGQIAKLIRKQDPAYLAELEERAQKLKTYYETLQKTAKTKCTATQSHVDKYSSMALSF RLYVNESIFNHEGKVVSELEKYDNGAILDEYQVFEQQELKRKASSSSASKNQLEDSGNDENETNNNSNNDKS
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.